Query= MSMg01no094_i17.b1 MSMg01no094_i17.b1 CHROMAT_FILE:
MSMg01no094_i17.b1 PHD_FILE: MSMg01no094_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:14 2005
(640 letters)
>mm_chr16_7074811_7075850
Length = 1040
Score = 1218 bits (630), Expect = 0.0
Identities = 633/634 (99%)
Strand = Plus / Plus
Query: 4 ggaattctactgacttccagcttttcatacggtaatttaaatccctaggagggcttccat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctactgacttccagcttttcatacggtaatttaaatccctaggagggcttccat 263
Query: 64 ttgtagagttacctgaccaacaggaaagagggttctatctgcaatggcctccaaggctgt 123
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttgtagagttacctgagcaacaggaaagagggttctatctgcaatggcctccaaggctgt 323
Query: 124 gactatctgtctggctaccaaacaaaggaacagattacggagcaattcctgctaaattat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gactatctgtctggctaccaaacaaaggaacagattacggagcaattcctgctaaattat 383
Query: 184 gcactacaagaaaagactatcctagagaaaaagtagtgaacagtcttaggagtcttctca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gcactacaagaaaagactatcctagagaaaaagtagtgaacagtcttaggagtcttctca 443
Query: 244 ggtgtccattcacctacggatcctcataagcccacttttgtcaagccctaggagaggcac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggtgtccattcacctacggatcctcataagcccacttttgtcaagccctaggagaggcac 503
Query: 304 ctagaaggcaaaatgacatcactacatcattcacagcctagaggaagaaacaatagatca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctagaaggcaaaatgacatcactacatcattcacagcctagaggaagaaacaatagatca 563
Query: 364 tttctaagctataaagacagcagaaggaagcaagtgtgttcagagctaatgtcttagata 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttctaagctataaagacagcagaaggaagcaagtgtgttcagagctaatgtcttagata 623
Query: 424 cagcagtaatttaactttttaatgagtagtatttgttcgtcaaccaatacctacaatttt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cagcagtaatttaactttttaatgagtagtatttgttcgtcaaccaatacctacaatttt 683
Query: 484 caattccaagaagttctgaaaccaaaaaatttaaggcctgagaccaaatctcacacagga 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 caattccaagaagttctgaaaccaaaaaatttaaggcctgagaccaaatctcacacagga 743
Query: 544 ataagacttgaccagaaatggctaacaagcaactatttatacactatcccagtctgcatg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ataagacttgaccagaaatggctaacaagcaactatttatacactatcccagtctgcatg 803
Query: 604 aatattcatgtcccttgccggggggggggggggg 637
||||||||||||||||||||||||||||||||||
Sbjct: 804 aatattcatgtcccttgccggggggggggggggg 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no094_i17.g1 MSMg01no094_i17.g1 CHROMAT_FILE:
MSMg01no094_i17.g1 PHD_FILE: MSMg01no094_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:15 2005
(595 letters)
>mm_chr16_7123679_7124673
Length = 995
Score = 1143 bits (591), Expect = 0.0
Identities = 594/595 (99%)
Strand = Plus / Minus
Query: 1 tcaggttaatcttgaagatatatttcagttaaccaattaggagaaaaaaaaccctcaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 tcaggttaatcttgaagatatatttcagttaaccaattaggagaaaaaaaaccctcaaag 736
Query: 61 acatggacataggccagcatctagacacgttccaatttcctcacaaaggcacagtgacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 acatggacataggccagcatctagacacgttccaatttcctcacaaaggcacagtgacct 676
Query: 121 tcatctaaggaaggtcccaaaatatcacagacattagtaaatgggaccctatctgagggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tcatctaaggaaggtcccaaaatatcacagacattagtaaatgggaccctatctgagggg 616
Query: 181 ttggtagaatccagtcatgccaggaacatgaaacctatcttttctgtctccatcccatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ttggtagaatccagtcatgccaggaacatgaaacctatcttttctgtctccatcccatgc 556
Query: 241 tggatcagctggctgctcattacattatgaaaatgagcatctcacaatgagagaagcctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tggatcagctggctgctcattacattatgaaaatgagcatctcacaatgagagaagcctg 496
Query: 301 aatgagcttgactccacttctttcaagcaatgggaatgactttttagtcccatttaaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aatgagcttgactccacttctttcaagcaatgggaatgactttttagtcccatttaaatg 436
Query: 361 taaagaaatatcatccccccaaatgggcaccatagctttcttcctttgtgggttggcctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 taaagaaatatcatccccccaaatgggcaccatagctttcttcctttgtgggttggcctt 376
Query: 421 tgtagtaaggctaacactgggctagccaagtgttgagttggtacttaaggtagaggtatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tgtagtaaggctaacactgggctagccaagtgttgagttggtacttaaggtagaggtatt 316
Query: 481 gtcactgtgcaataaaggcagcaagaatagttgaaagtaaaacatcaaagagcacaggcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gtcactgtgcaataaaggcagcaagaatagttgaaagtaaaacatcaaagagcacaggcc 256
Query: 541 cacaaaatacaagcatgaaaaaggccaggggtggaacagagagctcttacactgg 595
||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cacaaaataaaagcatgaaaaaggccaggggtggaacagagagctcttacactgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
