Query= MSMg01no095_i13.b1 MSMg01no095_i13.b1 CHROMAT_FILE:
MSMg01no095_i13.b1 PHD_FILE: MSMg01no095_i13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:35 2005
(638 letters)
>mm_chr16_92511838_92512875
Length = 1038
Score = 1106 bits (572), Expect = 0.0
Identities = 584/588 (99%), Gaps = 1/588 (0%)
Strand = Plus / Minus
Query: 51 gttcagaggaacccaaaattggtgagagaggtcctacggagcctgggtgttccaacacac 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1038 gttcagaggaacccaaaattggtgagagaggtcctacggagcctgggtgttccaacacac 979
Query: 111 tcataaaccacataaggggataacaaacaaggtgacgtaaaagcatgagacatcaactag 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978 tcataaaccacataaggggataacaaacaaggtgacgtaaaagcatgagacatcaactag 919
Query: 171 aacatcacacacactgtctacattcgccaactaaacactactgctagggagcggggacag 230
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 918 aacatcacacacactgtctacattcgccaactaaacactactgctggggagtggggacag 859
Query: 231 ggacgggggcgggggcgggggggcaatgcacaagaacacctttgccatgaaataaataca 290
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 ggacgggggcaggggc-ggggggcaatgcacaagaacacctttgccatgaaataaataca 800
Query: 291 gggctctggggagatgctgacctcacagacctcagaatctaactccgcagctcaaattct 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 gggctctggggagatgctgacctcacagacctcagaatctaactccgcagctcaaattct 740
Query: 351 agaatttctatccgtgagtctctcttccgggctgatgccaagtggttccctggcattact 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 agaatttctatccgtgagtctctcttccgggctgatgccaagtggttccctggcattact 680
Query: 411 gttagaagactcaccaccatggcccctcctctctctcctggtaccccctgctctagcttt 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gttagaagactcaccaccatggcccctcctctctctcctggtaccccctgctctagcttt 620
Query: 471 gttctgctcagcagcatctgtctcctgtcttcctccacagtctgtacctttgtcaacctc 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gttctgctcagcagcatctgtctcctgtcttcctccacagtctgtacctttgtcaacctc 560
Query: 531 tcctctctcaatcaggaacaggatggacccactggagacctgagcagaccaccctgaagt 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tcctctctcaatcaggaacaggatggacccactggagacctgagcagaccaccctgaagt 500
Query: 591 tgagagagggcaggacaggtgtaacccagaaagatgtctacagaccac 638
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tgagagagggcaggacaggtgtaacccagaaagatgtctacagaccac 452
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_i13.g1 MSMg01no095_i13.g1 CHROMAT_FILE:
MSMg01no095_i13.g1 PHD_FILE: MSMg01no095_i13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:35 2005
(582 letters)
>mm_chr16_92421237_92422218
Length = 982
Score = 1102 bits (570), Expect = 0.0
Identities = 579/582 (99%)
Strand = Plus / Plus
Query: 1 attcaaatatgagaccccacaaacacagcaagcaagtgtgaggtgtgaaagccacctcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcaaatatgagaccccacaaacacagcaagcaagtgtgaggtgtgaaagccacctcca 260
Query: 61 agtctctcccttccctaatgaatccaaggacagtggcagcaaggctttcaaaggcaccca 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 agtctctcccttccctaatgaatccagggacagtggcagcaaggctttcaaaggcaccca 320
Query: 121 tcgtggcaagagaaatccggggtggattcgtgccaaaagtatctcccttgagcgctgccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcgtggcaagagaaatccggggtggattcgtgccaaaagtatctcccttgagcgctgccc 380
Query: 181 ctttcccagtggtgagcaggaagctgcactggctggctcctgggcggaaaacttacacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 ctttcccagtggtgagcaggaagctgcactggctggctcctgggcggaaaactcacacag 440
Query: 241 caatgtatgcttgcagaaaatgtctgtaattgtttcttccctggaaaaggggatgacaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caatgtatgcttgcagaaaatgtctgtaattgtttcttccctggaaaaggggatgacaaa 500
Query: 301 gcctgaatcatgcctggactttaagatgatgctcgtttgccactttccattggagcaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcctgaatcatgcctggactttaagatgatgctcgtttgccactttccattggagcaatc 560
Query: 361 aaggggggatgagagccggcggctctgcctctccaggctgacctccttcatctggccaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaggggggatgagagccggcggctctgcctctccaggctgacctccttcatctggccaca 620
Query: 421 agcccacactctgcaagcatggcatcggggctgagatttgctgtgacgccccctagtggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agcccacactctgcaagcatggcatcggggctgagatttgctgtgacgccccctagtggc 680
Query: 481 tacttttcctctctgtcccctcagcactaaagcactaagacattacagtccctcttgaac 540
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 681 tacttttcctctctgtcccctcagcactaaagcactaagacattacagcccctcttgaac 740
Query: 541 ctttcctcactgtgctcttgactctcttcctgctcaaggagt 582
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctttcctcactgtgctcttgactctcttcctgctcaaggagt 782
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
