Query= MSMg01no096_h02.b1 MSMg01no096_h02.b1 CHROMAT_FILE:
MSMg01no096_h02.b1 PHD_FILE: MSMg01no096_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:48 2005
(313 letters)
>mm_chr16_35590245_35590957
Length = 713
Score = 561 bits (290), Expect = e-164
Identities = 308/316 (97%), Gaps = 5/316 (1%)
Strand = Plus / Plus
Query: 1 catttcctatccc---gccaaactgggggcgacctgtcctcctctgtccttcctcctctc 57
||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 catttccta--ccaaagccaaactgggggcgacctgtcctcctctgtccttcctcctctc 257
Query: 58 gctgatgtgtcccttccctgcttccatggcaagtagcagaaagccaaaagagcagtttat 117
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 258 gctgatgtgtcccttccctgcttccatggcaagtaacagaaagccaaaagagcagtttat 317
Query: 118 tttgcagttactagtgttgggctaaggggatgggttggccacagctcctatcgtcctatc 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 318 tttgcagttactagtgttgggctaaggggatgggttggccacagctcctatcgtcctagc 377
Query: 178 tgactccattgttgtttgggtggcagcatcaggagactcccggctttagcagtaggtgaa 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tgactccattgttgtttgggtggcagcatcaggagactcccggctttagcagtaggtgaa 437
Query: 238 gcttggagacgacctccttacctcaccaatggttgctgggaaaggctttctcaagccaaa 297
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 438 gcttggagacgacctccttacctcaccaatggttgctgggaaaggctgtctcaagccaaa 497
Query: 298 tccatctctaacatcc 313
||||||||||||||||
Sbjct: 498 tccatctctaacatcc 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no096_h02.g1 MSMg01no096_h02.g1 CHROMAT_FILE:
MSMg01no096_h02.g1 PHD_FILE: MSMg01no096_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:48 2005
(169 letters)
>mm_chr16_35733065_35733633
Length = 569
Score = 298 bits (154), Expect = 1e-85
Identities = 163/166 (98%)
Strand = Plus / Minus
Query: 4 tatctgtcagtctccttgttcttcagctggctctcactggaaacttacttccaggtcagg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tatctgtcagtctccttgttcttcagctggctctcactggaaacttacttccaggtcagg 310
Query: 64 tctgtatatgccgcactctgtggttagacaggactctgtcctttgtgttccttgtgactt 123
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tctgtagatgtcgcactctgtggttagacaggactctgtcctttgtgttccttgtgactt 250
Query: 124 tttagtcaaacctttgcactgaggtggtcttccctttagctttagg 169
||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 249 tttagtcaaacctttgcactgaggtgggcttccctttagctttagg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 569
Length adjustment: 8
Effective length of query: 161
Effective length of database: 561
Effective search space: 90321
Effective search space used: 90321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
