MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-100G09
Chromosome	16 (Build37)
Map Location	21,724,880 - 21,725,123
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Thpo, Chrd, LOC666255, LOC671504, EG666274, EG625060, LOC625123, LOC676915, 2310042E22Rik, Ephb3, 6430590I03Rik, Vps8, 2510009E07Rik
Downstream gene	Ehhadh, LOC100043489, LOC546659, Map3k13, LOC624037, Tmem41a, Liph, Senp2, EG239760, Igf2bp2, EG545152, EG666421, Sfrs10, LOC100043507, Etv5, Dgkg, LOC671242, LOC666459
Link	Open Mouse BAC browser

Click to get alignment info.

name	Thpo (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21832 MGI:101875
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chrd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12667 MGI:1313268
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666255 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666255
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 2 Proteins pseudo : _no_value

name	LOC671504 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671504
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	EG666274 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666274 MGI:3645627
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 1279 ESTs, 8 Proteins

name	EG625060 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625060 MGI:3644103
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 mRNAs, 8 ESTs, 8 Proteins

name	LOC625123 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625123
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 4 Proteins

name	LOC676915 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676915
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins pseudo : _no_value

name	2310042E22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66561 MGI:1913811
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ephb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13845 MGI:104770
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6430590I03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76222 MGI:1923472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs, 2 Proteins

name	Vps8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209018 MGI:2146407
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2510009E07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72190 MGI:1919440
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ehhadh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74147 MGI:1277964
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043489 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043489
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	LOC546659 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546659
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 ESTs, 8 Proteins pseudo : _no_value

name	Map3k13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71751 MGI:2444243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC624037 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:624037
definition	note : proteasome (prosome, macropain) subunit, beta type 3 pseudogene pseudo : _no_value

name	Tmem41a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66664 MGI:1913914
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Liph (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239759 MGI:2388029
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Senp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75826 MGI:1923076
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG239760 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239760 MGI:3645174
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins

name	Igf2bp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319765 MGI:1890358
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG545152 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545152 MGI:3647324
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 176 ESTs

name	EG666421 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666421 MGI:3645751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 21 Proteins pseudo : _no_value

name	Sfrs10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20462 MGI:106016
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043507 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043507
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 186 ESTs, 10 Proteins

name	Etv5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104156 MGI:1096867
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dgkg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110197 MGI:105060
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC671242 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671242
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs, 7 Proteins

name	LOC666459 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666459
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Thpo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364337 GeneID:21832 MGI:101875
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thrombopoietin transcript_id : NM_009379.3

name	Chrd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753417 GeneID:12667 MGI:1313268
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chordin transcript_id : NM_009893.1

name	EG666274 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267468 GeneID:666274 MGI:3645627
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 1279 ESTs, 8 Proteins product : predicted gene, EG666274 transcript_id : XM_982692.2

name	EG625060 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400114 GeneID:625060 MGI:3644103
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 mRNAs, 8 ESTs, 8 Proteins product : predicted gene, EG625060 transcript_id : XM_889601.2

name	LOC625123 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267470 GeneID:625123
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 4 Proteins product : hypothetical LOC625123 transcript_id : XM_889664.2

name	2310042E22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803385 GeneID:66561 MGI:1913811
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310042E22 gene transcript_id : NM_025634.2

name	Ephb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859547 GeneID:13845 MGI:104770
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Eph receptor B3 transcript_id : NM_010143.1

name	Vps8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486982 GeneID:209018 MGI:2146407
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vacuolar protein sorting 8 homolog (S. cerevisiae) transcript_id : NM_001081366.1

name	2510009E07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:49457852 GeneID:72190 MGI:1919440
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2510009E07 gene transcript_id : NM_001001881.1

name	Ehhadh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31541814 GeneID:74147 MGI:1277964
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase transcript_id : NM_023737.2

name	LOC100043489 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267473 GeneID:100043489
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100043489, transcript variant 2 transcript_id : XM_001480816.1

name	LOC100043489 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267471 GeneID:100043489
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100043489, transcript variant 1 transcript_id : XM_001480812.1

name	Map3k13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:95113637 GeneID:71751 MGI:2444243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen-activated protein kinase kinase kinase 13 transcript_id : NM_172821.2

name	Tmem41a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142359794 GeneID:66664 MGI:1913914
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 41a transcript_id : NM_025693.2

name	Liph (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:140970703 GeneID:239759 MGI:2388029
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lipase, member H transcript_id : NM_001083894.1

name	Liph (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:140971804 GeneID:239759 MGI:2388029
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lipase, member H transcript_id : NM_153404.2

name	Senp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560058 GeneID:75826 MGI:1923076
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SUMO/sentrin specific peptidase 2 transcript_id : NM_029457.2

name	EG239760 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400117 GeneID:239760 MGI:3645174
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins product : predicted gene, EG239760 transcript_id : XM_983617.1

name	Igf2bp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33942111 GeneID:319765 MGI:1890358
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin-like growth factor 2 mRNA binding protein 2 transcript_id : NM_183029.1

name	EG545152 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267477 GeneID:545152 MGI:3647324
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 176 ESTs product : predicted gene, EG545152 transcript_id : XM_619384.4

name	Sfrs10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802029 GeneID:20462 MGI:106016
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : splicing factor, arginine/serine-rich 10 (transformer 2 homolog, Drosophila) transcript_id : NM_009186.3

name	LOC100043507 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267480 GeneID:100043507
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 186 ESTs, 10 Proteins product : similar to G protein gamma-5 subunit transcript_id : XM_001480840.1

name	Etv5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24528549 GeneID:104156 MGI:1096867
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ets variant gene 5 transcript_id : NM_023794.2

name	Dgkg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20149723 GeneID:110197 MGI:105060
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : diacylglycerol kinase, gamma transcript_id : NM_138650.1

name	LOC671242 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267482 GeneID:671242
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs, 7 Proteins product : similar to high mobility group nucleosomal binding domain 2 transcript_id : XM_001480849.1

name	Thpo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678341 GeneID:21832 MGI:101875
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0005179 - hormone activity [Evidence IEA] GO_process : GO:0008283 - cell proliferation [Evidence IEA]; GO:0050875 - cellular physiological process [Evidence IEA]; GO:0030099 - myeloid cell differentiation [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 note : myeloproliferative leukemia virus oncogene ligand product : thrombopoietin protein_id : NP_033405.1

name	Chrd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753418 CCDS:CCDS28059.1 GeneID:12667 MGI:1313268
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0008201 - heparin binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0045545 - syndecan binding [Evidence IDA] GO_process : GO:0007417 - central nervous system development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0009953 - dorsal/ventral pattern formation [Evidence IMP]; GO:0030900 - forebrain development [Evidence IMP]; GO:0010003 - gastrulation (sensu Mammalia) [Evidence IMP]; GO:0001707 - mesoderm formation [Evidence IMP]; GO:0030514 - negative regulation of BMP signaling pathway [Evidence IDA]; GO:0045668 - negative regulation of osteoblast differentiation [Evidence IDA]; GO:0001649 - osteoblast differentiation [Evidence IDA]; GO:0007389 - pattern specification [Evidence IMP]; GO:0001501 - skeletal development [Evidence IMP] codon_start : 1 product : chordin protein_id : NP_034023.1

name	EG666274 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94400113 GeneID:666274 MGI:3645627
definition	codon_start : 1 product : hypothetical protein protein_id : XP_987786.1

name	EG625060 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82959136 GeneID:625060 MGI:3644103
definition	codon_start : 1 product : hypothetical protein protein_id : XP_894694.1

name	LOC625123 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82959144 GeneID:625123
definition	codon_start : 1 product : hypothetical protein protein_id : XP_894757.1

name	2310042E22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385096 GeneID:66561 MGI:1913811
definition	codon_start : 1 product : hypothetical protein LOC66561 protein_id : NP_079910.1

name	Ephb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859548 CCDS:CCDS28060.1 GeneID:13845 MGI:104770
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008046 - axon guidance receptor activity [Evidence IDA]; GO:0005003 - ephrin receptor activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0005005 - transmembrane-ephrin receptor activity [Evidence TAS] GO_process : GO:0007411 - axon guidance [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IEA] codon_start : 1 product : Eph receptor B3 protein_id : NP_034273.1

name	Vps8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486983 GeneID:209018 MGI:2146407
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : vacuolar protein sorting 8 homolog protein_id : NP_001074835.1

name	2510009E07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:49457853 CCDS:CCDS28062.1 GeneID:72190 MGI:1919440
definition	codon_start : 1 product : hypothetical protein LOC72190 protein_id : NP_001001881.1

name	Ehhadh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541815 CCDS:CCDS28063.1 GeneID:74147 MGI:1277964
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA]; GO:0005777 - peroxisome [Evidence TAS] GO_function : GO:0003857 - 3-hydroxyacyl-CoA dehydrogenase activity [Evidence TAS]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0004165 - dodecenoyl-CoA delta-isomerase activity [Evidence IEA]; GO:0004300 - enoyl-CoA hydratase activity [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006637 - acyl-CoA metabolism [Evidence TAS]; GO:0006635 - fatty acid beta-oxidation [Evidence TAS]; GO:0006631 - fatty acid metabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : L-bifunctional enzyme product : L-specific multifunctional beta-oxdiation protein protein_id : NP_076226.2

name	LOC100043489 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149267472 GeneID:100043489
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001480862.1

name	LOC100043489 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149267474 GeneID:100043489
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001480866.1

name	Map3k13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:95113638 GeneID:71751 MGI:2444243
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA] codon_start : 1 product : mitogen-activated protein kinase kinase kinase 13 protein_id : NP_766409.2

name	Tmem41a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313376 CCDS:CCDS28064.1 GeneID:66664 MGI:1913914
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 product : transmembrane protein 41a protein_id : NP_079969.1

name	Liph (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23510279 GeneID:239759 MGI:2388029
definition	GO_component : GO:0005576 - extracellular region [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; lipase H product : lipase, member H isoform 2 protein_id : NP_700453.1

name	Liph (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:140970704 GeneID:239759 MGI:2388029
definition	GO_component : GO:0005576 - extracellular region [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; lipase H product : lipase, member H isoform 1 protein_id : NP_001077363.1

name	Senp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386400 CCDS:CCDS28065.1 GeneID:75826 MGI:1923076
definition	GO_component : GO:0005643 - nuclear pore [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0016929 - SUMO-specific protease activity [Evidence ISS] GO_process : GO:0016926 - protein desumoylation [Evidence IDA]; GO:0006508 - proteolysis [Evidence IEA]; GO:0030111 - regulation of Wnt receptor signaling pathway [Evidence ISS]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 note : SUMO-1/Smt3-specific isopeptidase 2; SUMO-1 protease-1 product : SUMO/sentrin specific protease 2 protein_id : NP_083733.1

name	EG239760 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149267300 GeneID:239760 MGI:3645174
definition	codon_start : 1 product : hypothetical protein protein_id : XP_988711.2

name	Igf2bp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33942112 GeneID:319765 MGI:1890358
definition	GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006417 - regulation of protein biosynthesis [Evidence IEA]; GO:0006445 - regulation of translation [Evidence IEA] codon_start : 1 note : insulin-like growth factor 2 mRNA-binding protein 2; insulin-like growth factor 2, binding protein 2 product : insulin-like growth factor 2 mRNA binding protein 2 protein_id : NP_898850.1

name	EG545152 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82959168 GeneID:545152 MGI:3647324
definition	codon_start : 1 product : similar to Transmembrane protein 97 protein_id : XP_619384.2

name	Sfrs10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677975 GeneID:20462 MGI:106016
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence ISS] [Evidence IEA] codon_start : 1 note : silica-induced gene 41 product : splicing factor, arginine/serine-rich 10 protein_id : NP_033212.1

name	LOC100043507 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149267481 GeneID:100043507
definition	codon_start : 1 product : similar to G protein gamma-5 subunit protein_id : XP_001480890.1

name	Etv5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24528550 GeneID:104156 MGI:1096867
definition	GO_component : GO:0005634 - nucleus [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0009887 - organ morphogenesis [Evidence IDA]; GO:0045941 - positive regulation of transcription [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : ets variant gene 5 protein_id : NP_076283.2

name	Dgkg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20149724 CCDS:CCDS28068.1 GeneID:110197 MGI:105060
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0004143 - diacylglycerol kinase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007205 - protein kinase C activation [Evidence IEA] codon_start : 1 note : diacylglycerol kinase, gamma 3; diacylglycerol kinase, gamma 90kDa product : diacylglycerol kinase, gamma protein_id : NP_619591.1

name	LOC671242 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149267483 GeneID:671242
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480899.1

name	LOC671504 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671504
definition	number : 1 pseudo : _no_value

name	LOC671504 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671504
definition	number : 2 pseudo : _no_value

name	LOC666459 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666459
definition	number : 1 pseudo : _no_value

name	LOC666255 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149267467 GeneID:666255
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 2 Proteins product : similar to hCG1641837 pseudo : _no_value transcript_id : XR_034839.1

name	LOC676915 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149267298 GeneID:676915
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins product : similar to nuclear domain 10 protein 52 like 1 pseudo : _no_value transcript_id : XR_034101.1

name	6430590I03Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94400115 GeneID:76222 MGI:1923472
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs, 2 Proteins product : RIKEN cDNA 6430590I03 gene transcript_id : XR_002321.1

name	LOC546659 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149267476 GeneID:546659
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 ESTs, 8 Proteins product : similar to Ribosomal protein L12 pseudo : _no_value transcript_id : XR_034852.1

name	EG666421 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149267478 GeneID:666421 MGI:3645751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 21 Proteins product : predicted gene, EG666421 pseudo : _no_value transcript_id : XR_035704.1

clone name	MSMg01-342N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184L09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-436C08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-517L11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-402H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167P17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-423K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453L18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-142D03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-400A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334P17
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-100G09.T7 (MSMg01no100_g09.b1)	MSMg01-100G09.TJ (MSMg01no100_g09.g1)
ACC	AG316110	AG316111
length	1,279	773
length of high quality (start - end)	---	242 (128 - 369)
definition	CHROMAT_FILE: MSMg01no100_g09.b1 PHD_FILE: MSMg01no100_g09.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:58:14 2005	CHROMAT_FILE: MSMg01no100_g09.g1 PHD_FILE: MSMg01no100_g09.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:58:15 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	NNNNNNNNNNNNNNNCCCCNNNNCCCCNNNNNCCCCNCCCCCCCNNNCNN NCCCCNTTNTNNNCCNNNNCNCCTTTNNNCCNNTNCTCCTTCNCTTTTAT ATTGTTGTCTTGTCTAATATAGCACTTTCACTATTATTTAGTAGAGTATC CTTGCGTTAACACCCGTGCCTCTACCGTATGTCGTTCTTGGCCTGGGATA GATGCGCCTCTTGTTTTTCTTGACACTCCGCGTCTCTCCCACAGGCTCAC GCGCCCTACGCGGAGCCGTTATTACCGGTTTTGCACACTCGCCCGCGTGG ACGGCGCGTTTCCGTCGTGGGGGTGGCCGGCGGTTTGTGCATCGGATCCT CCCCCGCCGCCTTCCACGTTCGTCCATTCCCGCTCGACGCGCCATCTCTT AGCTCGCATGCCGTATCCTATTCGTATGCTCACTATTCGTTCCGCCTTTG CGCGGCGCTTACACCTTTATAACACTATTATATTTCTTCCTTTGTGTGCG GGTGGTGCGGGCGGGCCTAAGTATTCGACCGATTGGCGCGCGCTTGATTG CTGACGGTCGCGCCCCATACAGACATACTAATAACGTACTAGACACCCGC TTGTCTACCTCGCGCCGTCTTTTGCGTATACGCGCGCAGCGCTCGAGCGC CGGCGTCTGCGGCGACTTAGTGAGTGCCGCATATGCGCTTGCTCGCGGCG TGCGATTTTCTTCCGGCGCACATTCTACTCACGGCCGCGTGTTGTGGGGT TTTGCCGCTGAGTGCATTTGTTATGTCTGAGTGACAGACGTTAGACGTTG TTAACTATACTCGTAAGCCACAGAGCTGAGGGCTGAGCCAAAGCGGCGAG GCGCGCCGAGACGAGATACAGCCAGTGTTCGCCGGGTTACCGCCCCCGGC CCACTAATCCGCCCGTGCGATTTGCCGTAAGTATCGCAGGGTAATGGGTT AGTCCCGCGCATCATTCCGGTGTGGCCGTCTGTTGTGTCGTACGATCGAT ACGGGGTACAGGTTGCGGTTACCCCGAAGCGTACCATATAGCAACAAGAG AGGGCGGCTGGTAAATAAGAGTCGGAGCCGCCGCCATCATGACGCCCGAG GAGAAGTCGTGATGAGGGGATGCGACCGCGAGAAGAGGCGGGCCGGAATG TGGGACGCTGTGGTGTGGACGGTANGTGTCCAATGCTGTGAGATGCACTC TGTGGATCCGTTAGTGTCTCATCTGCGGTACGAGNTGAGGCTGGGCTCGT GATGTGATGGTAGATGTCGCGTAGATTAG	NNNNTTTTNNNNNNNNNNNNNNNTTTTNCCCCCCTTCCTTCTCCCATTTT TTTTTCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXTTGCGTTATTGAGGGATTAGTGG GATCCCTCTGAGAAATGGCCATTGTGTTTTATTTTCTAGATTAATCTCCA GTTGCCTTGCCTTCTCCATGCTGATTATTCGTTCTACCTTTTAATTATTA TTGTTAATTACTCTCAGAGTTGGGATGAGAAAAATCAGGGAGGCATCATT TATACACAGTCGTCTGCTTAACTACCTACATCTATTTACATATGTTATAA AGCATCTGAGAGAATGAGGAATTGTCCCAAAGAGATGACAGAGCAGAGCT GGAGTGGTGATTGTACCTTGTCAAGGCCCATGATGGAGAAAGAGGGTGAG TAGATACAGAAGCACAGGTGCCAACATTTAAACTTGGCTGCACTGGGCTG CTGCAGGTGAAACTGTGAGGCTCACTCTCATACAGCATCAGGGTAAGGAA AAGTGTGTAGTATGGTAAGCCCATATCACCCCTTCTCCCTTCCTCTGTAG CTAACGTCCCCACTACTCTGTGCCTTGTCTGTACCTGGGTTAGCCAGAAT TCTTGACAGAAACTGAACTTTTGTTTGTTGAGCCTTTGACTGGCCGAATG CTTCTATATTTACTATTCGTTTCCTTTTGTCCATAAATGGTTTGGTTTTT TTCCTCTCCTGGGATTCTTGATG
quality values	Open. Hide. 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 7 3 0 0 0 0 3 7 7 3 0 0 0 0 0 3 7 7 3 0 3 7 7 24 8 8 3 0 0 0 3 0 0 0 3 7 7 3 0 3 3 0 3 0 0 0 3 3 0 0 0 0 3 0 3 12 12 15 3 0 0 0 3 3 0 0 3 0 3 13 19 24 19 15 3 0 3 11 10 10 6 6 6 6 8 12 13 10 9 6 8 8 8 8 8 10 10 10 9 9 8 8 8 9 8 8 8 8 8 10 8 8 8 8 8 8 9 9 9 8 8 6 6 8 6 11 12 10 8 8 8 8 8 8 10 10 12 8 8 8 8 10 10 7 7 12 8 13 9 8 8 8 6 6 8 8 8 8 8 8 9 10 10 8 8 6 6 8 13 13 8 8 8 8 8 8 8 8 10 6 7 7 9 7 8 8 8 8 8 8 8 11 15 8 10 9 8 12 10 10 9 9 9 10 8 8 6 6 6 6 10 10 10 10 10 10 11 10 9 9 11 11 6 6 6 6 8 6 8 8 8 6 6 6 6 8 8 8 8 13 15 8 12 6 6 6 6 8 8 8 8 8 8 11 6 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 8 8 8 10 9 9 9 9 9 8 8 6 6 8 8 8 6 8 8 8 8 9 8 8 8 6 6 8 8 15 10 10 10 10 10 10 11 8 8 8 8 11 10 10 8 8 7 8 8 9 8 8 8 8 8 8 8 8 8 8 8 10 6 6 6 6 8 6 6 6 6 6 10 10 6 6 6 6 10 10 10 10 8 8 8 8 8 9 9 8 6 6 6 8 8 9 10 8 8 9 8 10 8 9 8 10 10 10 9 8 8 8 8 12 10 10 8 8 6 6 8 8 10 8 6 6 8 8 8 6 6 8 7 7 6 6 6 8 8 10 8 8 8 8 8 8 9 9 9 10 12 13 11 11 11 8 8 8 6 6 6 6 6 8 8 8 8 8 10 11 11 12 12 8 8 8 8 8 8 8 8 10 10 10 10 8 10 11 11 8 8 6 6 8 10 10 10 9 9 9 10 13 8 8 8 8 10 10 8 8 8 8 8 8 10 8 9 9 9 8 8 7 6 6 6 6 7 6 6 8 8 8 8 8 10 11 10 10 11 16 12 12 12 12 12 11 11 10 6 6 6 7 8 8 8 8 6 8 8 8 8 9 6 6 6 6 8 8 6 6 10 12 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 9 10 10 15 15 10 8 6 6 6 8 8 10 9 9 11 13 13 9 8 8 8 8 8 8 8 10 8 8 6 6 8 8 8 8 7 7 10 8 8 13 10 13 8 8 6 6 6 6 8 8 8 8 8 8 8 6 7 7 6 6 6 6 6 8 8 8 8 8 8 10 8 8 8 8 8 8 9 9 9 8 8 8 8 8 8 7 7 7 9 8 11 7 6 6 6 8 8 8 8 10 10 12 10 15 12 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 9 9 9 9 11 11 11 12 11 15 10 8 8 8 8 8 6 6 8 8 8 8 8 8 10 8 8 8 6 8 6 6 6 8 10 10 8 6 6 8 8 8 8 8 8 8 10 8 7 6 7 8 8 9 8 8 8 8 6 8 8 6 6 8 8 8 10 8 8 8 8 8 8 10 8 8 8 8 10 10 10 11 11 8 8 8 8 6 6 8 8 9 11 11 11 11 10 8 8 6 6 8 8 8 6 6 7 8 8 7 7 9 9 8 8 6 8 6 6 8 6 6 6 6 8 8 8 8 8 8 8 11 10 10 10 10 11 10 10 10 8 8 6 6 8 6 6 6 6 8 6 9 8 8 6 6 6 6 6 8 8 8 8 8 8 6 6 6 8 8 8 8 8 8 8 8 8 8 8 10 13 11 12 12 8 8 8 8 8 8 6 6 6 6 10 10 16 9 11 7 6 8 8 11 11 11 8 8 8 8 11 10 10 8 10 9 9 10 15 10 15 10 10 10 8 8 8 8 8 12 8 10 8 10 10 10 6 6 6 6 10 8 9 9 11 11 11 12 8 6 6 6 6 6 8 8 7 7 6 8 8 8 11 12 10 12 6 6 6 6 6 6 10 8 8 8 8 9 8 6 6 6 6 6 8 8 8 8 8 8 8 9 8 8 6 6 6 8 11 11 11 9 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 6 6 6 6 9 7 8 8 10 10 10 8 8 8 8 8 10 10 10 10 10 10 11 8 8 8 10 10 9 10 10 9 9 9 6 6 6 6 8 8 8 8 8 13 10 11 8 8 8 8 8 8 8 8 8 8 10 10 8 7 7 7 8 6 6 6 8 8 8 8 8 6 6 6 6 6 8 8 8 10 8 8 8 8 10 7 6 8 8 8 9 10 15 15 20 10 10 6 6 8 11 8 8 8 8 8 8 9 10 10 10 11 8 10 6 6 8 8 10 10 10 9 9 10 9 9 8 10 6 6 6 6 6 6 6 8 6 6 8 8 8 8 8 8 8 8 6 6 8 10 10 13 7 7 6 6 3 0 3 6 6 6 7 10 8 10 6 6 6 6 9 10 13 12 8 8 8 8 6 6 6 6 6 6 8 8 8 8 6 6 8 8 6 6 8 8 11 11 8 6 6 6 6 6 6 6 6 6 8 8 8 7 6 6 6 6 3 0 3 6 7 8 8 8 6 6 8 8 8 6 6 6 6 6 6 6 8 8 8 8 8 10 8 8 8 6 6 8 8 10 10 8 8 9 8 8 8 8 8 8 8 8	Open. Hide. 0 0 0 0 3 7 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 7 7 3 0 3 7 7 9 9 9 9 7 9 6 6 6 6 6 8 8 8 8 10 9 9 17 19 24 19 19 9 9 9 9 12 9 10 9 9 16 18 17 10 10 10 16 18 32 34 34 28 37 37 35 35 36 39 23 23 11 11 9 8 6 8 8 8 8 10 11 17 17 20 20 23 34 25 19 14 14 14 25 22 41 23 23 9 8 8 8 8 8 8 12 20 28 20 19 19 29 29 33 33 48 48 57 57 57 57 47 47 47 47 47 43 43 23 23 23 33 33 30 39 35 35 28 28 33 42 42 42 57 57 59 47 47 35 35 23 30 30 29 29 29 42 37 32 32 39 37 39 39 44 47 47 47 47 47 50 50 59 57 47 39 39 44 57 57 42 42 37 42 42 57 44 47 43 50 50 57 57 57 57 59 57 57 57 59 59 57 57 57 57 52 52 52 57 57 57 57 57 57 57 57 57 52 52 52 52 52 57 57 57 57 57 57 59 57 57 57 57 43 57 52 57 57 50 50 37 37 37 50 50 52 57 57 57 57 52 43 43 43 36 37 52 57 52 52 52 43 43 43 43 35 35 35 43 43 44 43 43 37 35 35 33 31 31 43 42 42 43 43 43 43 42 59 42 42 26 24 13 13 18 24 28 42 42 59 47 57 57 48 54 46 57 57 57 43 44 43 47 48 44 44 37 36 30 37 37 43 43 43 37 37 37 23 23 32 37 33 43 43 59 46 48 46 46 43 43 37 39 39 34 34 23 23 23 28 28 37 37 37 28 23 13 8 8 8 8 6 8 8 8 19 19 25 25 30 28 32 37 23 17 9 9 10 15 17 24 18 12 10 11 12 15 18 32 22 18 15 12 11 11 11 16 23 32 29 17 17 17 19 19 23 28 18 18 12 12 11 9 9 9 9 9 9 11 22 26 31 16 18 13 12 11 11 11 18 21 21 14 14 15 18 19 10 10 10 10 12 18 18 11 15 12 18 13 12 14 12 10 10 12 14 14 17 27 15 15 12 12 15 15 28 31 28 35 35 32 28 28 14 14 14 28 28 18 13 12 22 12 15 15 20 28 26 26 24 13 13 13 15 13 18 18 21 19 32 21 24 16 16 18 13 13 12 14 16 23 23 30 23 28 10 10 8 8 8 8 8 10 11 12 16 15 15 15 12 9 9 9 9 9 9 9 9 13 13 8 9 9 12 9 9 10 11 11 16 18 10 10 9 9 9 9 9 12 16 11 10 10 11 18 15 13 10 10 10 13 19 20 22 24 28 41 43 30 33 24 24 21 19 19 15 14 10 8 8 8 10 7 9 9 11 11 15 15 11 11 13 11 12 17 13 13 10 9 9 10 10 15 13 8 8 8 10 8 8 8 8 8 10 10 12 11 10 10 10 12 12 10 12 12 11 12 12 11 9 7 8 11 8 8 10 8 8 8 8 8 10 13 10 11 13 18 12 12 12 12 11 11 13 12 15 15 8 8 8 8 8 8 8 8 10 10 10 7 7 8 10 9 9 9 9 15 9 9 9 9 10 8 9 9 9 10 10 10 9 9 9 8 10 10 10 10 10 23 13 14 11 10 9 8 8 8 8 8 8 8 8 8 8 10 8 11 8 8 8 8 9 12 11 11 16 22 16 16 10 8 6 6 6 6 8 8 9 8 8 8 8 8 8 8 12 10 8 6 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no100_g09.g1 MSMg01no100_g09.g1 CHROMAT_FILE:
MSMg01no100_g09.g1 PHD_FILE: MSMg01no100_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:58:15 2005
         (242 letters)



>mm_chr16_21724680_21725323
          Length = 644

 Score =  414 bits (214), Expect = e-120
 Identities = 236/246 (95%), Gaps = 6/246 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgcgttattgagggattagtgggatccctctgagaaatggccattgtgttttattttct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttgcgttattgagggattagtgggatccctctgagaaatggccattgtgttttattttct 385

                                                                       
Query: 61  agattaatctccagttgccttgccttctccatgctgattattcgttctaccttttaatta 120
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 384 agattaatctccagttgccttgccttctccatgctgattattcattctaccttttaatta 325

                                                                       
Query: 121 ttattgttaattactctcagagttgggatgagaaaaatcagggaggcatcatttatacac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 324 ttattgttaattactctcagagttgggatgagaaaaatcagggaggcatcatttat--ac 267

                                                                       
Query: 181 agtcgtctgcttaa----ctacctacatctatttacatatgttataaagcatctgagaga 236
           |||| |||||||||    ||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 266 agtcatctgcttaactacctacctacatctatttgtatatgttataaagcatctgagaga 207

                 
Query: 237 atgagg 242
           ||||||
Sbjct: 206 atgagg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 644
Length adjustment: 9
Effective length of query: 233
Effective length of database: 635
Effective search space:   147955
Effective search space used:   147955
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information