Query= MSMg01no102_a06.b1 MSMg01no102_a06.b1 CHROMAT_FILE:
MSMg01no102_a06.b1 PHD_FILE: MSMg01no102_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:28 2005
(375 letters)
>mm_chr16_97446201_97446977
Length = 777
Score = 646 bits (334), Expect = 0.0
Identities = 364/374 (97%), Gaps = 2/374 (0%)
Strand = Plus / Minus
Query: 4 ggaattctacttt-ttactccctgcttgatga-acatgataaagtagcccctacataagc 61
||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 577 ggaattctactttgataatccctgcttgatgatacatgataaagtagcccctacataagc 518
Query: 62 taggtagatattaagcagatatattcatgcctggcccttgaataaataggataaaatttg 121
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 taggtagatattaagtagatatattcatgcctggcccttgaataaataggataaaatttg 458
Query: 122 aattgagcaacaactgggcttgtcattaaactgagtatatgaaaatggacaagaaagtta 181
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 457 aattgagcaacaactgggcttgtcattaaactgagtatgtgaaaatggacaagaaagtta 398
Query: 182 agatgcatctacgctcaagaacacatagttcttagtaacgaatgcagccataacatttac 241
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 397 agatgcatctacgctcaagaacacatagttcttagtaacgaacgcagccataacatttac 338
Query: 242 cagaaattcataaagcaaggggtaacaattaaaaagttacagaattgattggggaaacag 301
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 337 cagaaattcataaagcaaggggtaacagttaaaaagttacagaattgattggggaaacag 278
Query: 302 aaaacattgttacaagcagtatgtttaaagagattctcagtttgaaccttggaattttct 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 277 aaaacattgttacaagcagtatgtttaaagagattctcagtttgaaccttggaatttcct 218
Query: 362 tgcaaatgaaaaac 375
||||||||| ||||
Sbjct: 217 tgcaaatgagaaac 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 777
Length adjustment: 9
Effective length of query: 366
Effective length of database: 768
Effective search space: 281088
Effective search space used: 281088
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no102_a06.g1 MSMg01no102_a06.g1 CHROMAT_FILE:
MSMg01no102_a06.g1 PHD_FILE: MSMg01no102_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:28 2005
(417 letters)
>mm_chr16_97373699_97374515
Length = 817
Score = 783 bits (405), Expect = 0.0
Identities = 414/417 (99%)
Strand = Plus / Plus
Query: 1 tcacctggcttgtgttgtgttcagtgtccaaccatcccttcagcagattcctcttttccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcacctggcttgtgttgtgttcagtgtccaaccatcccttcagcagattcctcttttccc 260
Query: 61 ggtggcttgaaaggctgacaagagagtaagtatgagtgcttatggaggagaaactgagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtggcttgaaaggctgacaagagagtaagtatgagtgcttatggaggagaaactgagag 320
Query: 121 ggggcacctgtgcacactggggcagccccaaggtcttctagttcttctgacttcttagta 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggggcacctgtgcacactagggcagccccaaggtcttctagttcttctgacttcttagta 380
Query: 181 agtggacagaggtcattagctgagaatctgaagacaaacccgtactctgaggtctgggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtggacagaggtcattagctgagaatctgaagacaaacccgtactctgaggtctgggga 440
Query: 241 agaaggaactcttgggaaataagaaatctggggaggaagaagaagatctggaaggcccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 agaaggaactcttgggaaataagaaatctggggaggaagaagaagatctggaaggccaaa 500
Query: 301 agggggtctgaggagttgagaggcaatctggagatgtcagaggagatctggaaggctaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 501 agggggtctgaggagttgagaggcaatctggagatgtcagaggagatctggaagggtaaa 560
Query: 361 ggggtgtggatccaacacagtggaactgaatgtatagtgaaggctcacttcagctct 417
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggggtgtggatccaacacagtggaactgaatgtatagtgaaggctcacttcagctct 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
