Query= MSMg01no107_h23.b1 MSMg01no107_h23.b1 CHROMAT_FILE:
MSMg01no107_h23.b1 PHD_FILE: MSMg01no107_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:09:27 2005
(146 letters)
>mm_chr16_37628729_37629274
Length = 546
Score = 282 bits (146), Expect = 5e-81
Identities = 146/146 (100%)
Strand = Plus / Minus
Query: 1 catttagatacagcaagacccttttaagtgaatcgacaatgtttccttgcatttgaagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 catttagatacagcaagacccttttaagtgaatcgacaatgtttccttgcatttgaagtt 287
Query: 61 agtgaacactccataaggagttaaaactctggctggatagcgtacccattctacagatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 agtgaacactccataaggagttaaaactctggctggatagcgtacccattctacagatgg 227
Query: 121 gaaaaatgaaacatggagatactgca 146
||||||||||||||||||||||||||
Sbjct: 226 gaaaaatgaaacatggagatactgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 146
Length of database: 546
Length adjustment: 8
Effective length of query: 138
Effective length of database: 538
Effective search space: 74244
Effective search space used: 74244
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no107_h23.g1 MSMg01no107_h23.g1 CHROMAT_FILE:
MSMg01no107_h23.g1 PHD_FILE: MSMg01no107_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:09:28 2005
(338 letters)
>mm_chr16_37477916_37478653
Length = 738
Score = 580 bits (300), Expect = e-170
Identities = 329/344 (95%), Gaps = 12/344 (3%)
Strand = Plus / Plus
Query: 1 ctcacaatcctcctgctgcagcctccaaaatactgggattagaggcgtgtgtgccacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcacaatcctcctgctgcagcctccaaaatactgggattagaggcgtgtgtgccacaca 260
Query: 61 tggcttttcagtatgttagaggagtataccttacaggtgttagattcaggggtgggggg- 119
||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 261 tggcttttcagtatgttagaggagtataccttacaggtgttagattcggggggggggggg 320
Query: 120 -cagggagggtgtttctcatctcttttcctaaaggtagctgctacagtgagggaaggaag 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcagggagggtgtttctcatctcttttcctaaaggtagctgctacagtgagggaaggaag 380
Query: 179 ctggaaagatgggaattttccctgtgggtcagaggaagaaaattctgacttgcctggaac 238
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctggaaagatgggaattttcc-tgtgggtcagaggaagaaaattctgacttgcctggaac 439
Query: 239 gacatcagaactatttgctgaaaatgaaaacaagaacctattttta----gagaccttag 294
|||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 440 gacatcagaactatttgctgaaaatgaaaacaagaaccta-----aacaagagaccttag 494
Query: 295 aatcctgaagtttatcaaaaataacgtacggctgatatttaagg 338
||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 495 aatcctgaagtttatcaaaaataacgtacggctgagatttaagg 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
