Query= MSMg01no108_e05.b1 MSMg01no108_e05.b1 CHROMAT_FILE:
MSMg01no108_e05.b1 PHD_FILE: MSMg01no108_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:04 2005
(650 letters)
>mm_chr16_40798189_40799241
Length = 1053
Score = 1199 bits (620), Expect = 0.0
Identities = 638/644 (99%), Gaps = 4/644 (0%)
Strand = Plus / Plus
Query: 6 ggaattctggataaa-c-gatattatctagcttgaatcatttctgttattgaattttcta 63
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattctggataaaacagatattatctagcttgaatcatttctgttattgaattttcta 265
Query: 64 gcataaacaaaataagcatttttaaatgaatcacttgagaaatgttactattttacctcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gcataaacaaaataagcatttttaaatgaatcacttgagaaatgttactattttacctcc 325
Query: 124 atccccccaaaaaaattatcctctgtgaagatggtagttcctaaacactccataaagcaa 183
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atcccccccaaaaaattatcctctgtgaagatggtagttcctaaacactccataaagcaa 385
Query: 184 gagattattgaaataaaaattcaagcccactgtattgccagttaagatatttaataactt 243
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 386 gagattattgaaataaaaattcaagcccactgtattgccagttaaaatatttaataactt 445
Query: 244 tataatttctacaattgacccctggcaaagtcttcttttattggtaaaagatgcatttga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tataatttctacaattgacccctggcaaagtcttcttttattggtaaaagatgcatttga 505
Query: 304 agttgttggtgggacccctgtctgaaagattgctttgctgctgtagagctccagagtttc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 agttgttggtgggacccctgtctgaaagattgctttgctgctgtagagctccagagtttc 565
Query: 364 ccagaatcttcacactgactgtatcagagtcaaatattgcccaggctgtgtagaaagaca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ccagaatcttcacactgactgtatcagagtcaaatattgcccaggctgtgtagaaagaca 625
Query: 424 actttctttcttctcaaaacatgcctgcttcatagtcactgtttttgtattataacagtt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 actttctttcttctcaaaacatgcctgcttcatagtcactgtttttgtattataacagtt 685
Query: 484 ttttttcc-tcatttagtgtgcttcatttatattgaaatcttacagtttcacttaaagga 542
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ttttttccctcatttagtgtgcttcatttatattgaaatcttacagtttcacttaaagga 745
Query: 543 gctaatagtttgaaggtaaagcttggtataaaattcattaaaatcttcattgactctaca 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gctaatagtttgaaggtaaagcttggtataaaattcattaaaatcttcattgactctaca 805
Query: 603 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtngtgtgtgtgtg 646
|||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 806 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt-gtgtgtgtgtg 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1053
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1043
Effective search space: 667520
Effective search space used: 667520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_e05.g1 MSMg01no108_e05.g1 CHROMAT_FILE:
MSMg01no108_e05.g1 PHD_FILE: MSMg01no108_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:04 2005
(632 letters)
>mm_chr16_40857667_40858698
Length = 1032
Score = 1152 bits (596), Expect = 0.0
Identities = 623/632 (98%)
Strand = Plus / Minus
Query: 1 actaggcagtccatgtttaccttgaagttatggtgaggatgcttctatcaaggacagtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 actaggcagtccatgtttaccttgaagttatggtgaggatgcttctatcaaggacagtaa 773
Query: 61 tgaaattgctagcatgagacactgttatgacagttgagagcatatgtcttataattctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 tgaaattgctagcatgagacactgttatgacagttgagagcatatgtcttataattctgc 713
Query: 121 atctgcatttcattatttatcccattattacaaatttttagaaaaaaataatattcactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 atctgcatttcattatttatcccattattacaaatttttagaaaaaaataatattcactc 653
Query: 181 attgtatttctgtgaatgtcattgtttttgttattctagagaaactaaatgtaatacttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 attgtatttctgtgaatgtcattgtttttgttattctagagaaactaaatgtaatacttg 593
Query: 241 aaataccagagagaaaagtacagacttgtgattacactctgaatagaggtgaatgtctcc 300
||||||||||||||||| ||| |||||||| || ||||||||||||||||||| ||||||
Sbjct: 592 aaataccagagagaaaattacggacttgtggtttcactctgaatagaggtgaaagtctcc 533
Query: 301 ctctgagtgagacaaagtccctgttttcagagtgacagaaagagaggtggagagtagaga 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 532 ctctgagtgagacaaagtccctgctttcagagtgacagaaagagaggtggagagtagaga 473
Query: 361 gtgcatttcctctcttttaggtcctgagatattccagatactgctttctggtgccatgaa 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gtgcatttactctcttttaggtcctgagatattccagatactgctttctggtgccatgaa 413
Query: 421 tgtgtctaggtgaaagtctgaagctaacttgatagggatcatctctccaactgctgctgt 480
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tgtgtctaggtgagagtctgaagctaacttgatagggatcatctctccaactgctgctgt 353
Query: 481 ggagaacccaatcttcttggctggaaatcagggctcagaaggaacctgacagataactca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ggagaacccaatcttcttggctggaaatcagggctcagaaggaacctgacagataactca 293
Query: 541 gaaatcccaatgttttattttgtctaagtgaagataccttgctaatcccaaataaagttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gaaatcccaatgttttattttgtctaagtgaagataccttgctaatcccaaataaagttt 233
Query: 601 tctgttgaaacacacctcatcaggaagaataa 632
|||| |||||||||||||||||||||||||||
Sbjct: 232 tctgctgaaacacacctcatcaggaagaataa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
