Query= MSMg01no111_i05.b1 MSMg01no111_i05.b1 CHROMAT_FILE:
MSMg01no111_i05.b1 PHD_FILE: MSMg01no111_i05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:15:56 2005
(612 letters)
>mm_chr16_4840473_4841484
Length = 1012
Score = 1137 bits (588), Expect = 0.0
Identities = 606/612 (99%)
Strand = Plus / Plus
Query: 1 ggtatgcctgggcataggtgggtcctgggccagcatcagccttgttgggcttcaagacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggtatgcctgggcataggtgggtcctgggccagcatcagccttgttgggcttcaagacat 260
Query: 61 ttctggagacaaggctgccgctgatagcctagggcctcgtggcaggacaggtggacacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctggagacaaggctgccgctgatagcctagggcctcgtggcaggacaggtggacacag 320
Query: 121 atgctggaagtgctagccacagtctgcctccctgcctccaagtctttgaccttgccaagt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 atgctggaagtgctagccacagtctgcctccctgcctccaagtctttgaccttgccgagt 380
Query: 181 aaaggcttctagaactctcttatgccctgagaagccgcagaagattgcctgttctgctca 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaggcttctagaactctctcatgccctgagaagccgcagaagattgcctgttctgctca 440
Query: 241 ggagaagcctggtggacaggatcagacctggcactgtaaccctcagaggactgtcagtac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggagaagcctggtggacaggatcagacctggcactgtaaccctcagaggactgtcagtac 500
Query: 301 cgataggagtgttccggccactagaacttgctgccagcgagccactggatgaggttgcca 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctataggagtgttccggccactagaacttgctgccagcgagccactggatgaggttgcca 560
Query: 361 cggtgcctggtgcaagaacaatggagctgcttaggtcagtgtctgcctgagtgagggtgg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggtgcctggtgcaagaacaatggagctgcttaggtcagtgtctgcctgagtgagggtgg 620
Query: 421 cagctagatatcacagagaaattgggattgcctccgctgcgcccttccatgccctttctc 480
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagctagatatcacagagaggttgggattgcctccgctgcgcccttccatgccctttctc 680
Query: 481 tgggatgcttgggttatcgtatcctgccacccttagtagtcaccccttaaagacaaaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgggatgcttgggttatcgtatcctgccacccttagtagtcaccccttaaagacaaaaga 740
Query: 541 aaagactgttgctgtcagtactcaccccagaaaaggcagaggatgcctgaaaaaccaaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaagactgttgctgtcagtactcaccccagaaaaggcagaggatgcctgaaaaaccaaca 800
Query: 601 caaacaccagag 612
||||||||||||
Sbjct: 801 caaacaccagag 812
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space: 603204
Effective search space used: 603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no111_i05.g1 MSMg01no111_i05.g1 CHROMAT_FILE:
MSMg01no111_i05.g1 PHD_FILE: MSMg01no111_i05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:15:57 2005
(599 letters)
>mm_chr16_4939635_4940628
Length = 994
Score = 1081 bits (559), Expect = 0.0
Identities = 587/599 (97%), Gaps = 5/599 (0%)
Strand = Plus / Minus
Query: 1 caagaagcacctcaggatgagggcgggagcagcttttctagagccttcttctgcttctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 caagaagcacctcaggatgagggcgggagcagcttttctagagccttcttctgcttctct 735
Query: 61 gttgctgaggccaaggcctcggccagcttttccgagggcatcatgttgagtaccttaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gttgctgaggccaaggcctcggccagcttttccgagggcatcatgttgagtaccttaagg 675
Query: 121 gcaaatagaagttgatatttggcagtgctgacgaaggcgttgctcagaaagttaggaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gcaaatagaagttgatatttggcagtgctgacgaaggcgttgctcagaaagttaggaaag 615
Query: 181 ccgcctactcgatccttctgtgtgtacagtgggacacgtacaaggcccaggacctgtggg 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 614 ccgcctactcgatccttctgtgtgtacagtgggacccgtacaaggcccaggacctgtggg 555
Query: 241 acagagggcatgagtggggctgggctcttcttgtagaggcatgaccctggcagagatgcc 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 554 acagagggcatgagtggggctgggctcttcttgtagaggcaggaccctggcagagatgcc 495
Query: 301 tgtcagccaccagtttgcgaaagaaacaggggagacccaggcaggctctggccaggccag 360
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 494 tgtcagccaccagtttgccaaagaaacaggggagacccaggcagggtctggccaggccag 435
Query: 361 gccaggctggtggcagtaaagcgccttctctccaagttccaaggtcaatcctatgcactc 420
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gc-----tggtggcagtaaagtgccttctctccaagttccaaggtcaatcctatgcactc 380
Query: 421 cccaccctgtctggcagcaacctccatgatccctggtttcactccatgccccttagacca 480
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 379 cccaccctgtctggcagcaacccccatgatccctggtttcactccatgccccttagacca 320
Query: 481 cagaatctaccaatcccccaatttcctctcaggagataatcccaaacactgcatgcaacc 540
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cagaatctacaaatcccccaatttcctctcaggagataatcccaaacactgcatgcaacc 260
Query: 541 cggtctttttggtctcaatttcccaagcaggccctgttcatcccttccagtgaccccaa 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cggtctttttggtctcaatttcccaagcaggccctgttcatcccttccagtgaccccaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 994
Length adjustment: 10
Effective length of query: 589
Effective length of database: 984
Effective search space: 579576
Effective search space used: 579576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
