Query= MSMg01no113_i02.b1 MSMg01no113_i02.b1 CHROMAT_FILE:
MSMg01no113_i02.b1 PHD_FILE: MSMg01no113_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:57 2005
(557 letters)
>mm_chr16_44759017_44759973
Length = 957
Score = 915 bits (473), Expect = 0.0
Identities = 476/477 (99%)
Strand = Plus / Plus
Query: 64 gagagagagagagagagagagagagagagagagagagagagacaggcatgcttgacatgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gagagagagagagagagagagagagagagagagagagagagacaggcatgcttgacatgg 323
Query: 124 taacttttacctggtgatgtttgcttagtgaactacaagagctaattgaaaatctaacca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 taacttttacctggtgatgtttgcttagtgaactacaagagctaattgaaaatctaacca 383
Query: 184 tgttgccttcagccccttgaattggggagaatagggtgaggtagggctgagtggacaaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgttgccttcagccccttgaattggggagaatagggtgaggtagggctgagtggacaaca 443
Query: 244 gaacttcacctctcctaggcttgatcttgctttgagtcacaggatgccaccctctactct 303
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gaacctcacctctcctaggcttgatcttgctttgagtcacaggatgccaccctctactct 503
Query: 304 tagccatatcccaggatgaagattcctggaagaagtacatgaaaataatttccagaggaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tagccatatcccaggatgaagattcctggaagaagtacatgaaaataatttccagaggaa 563
Query: 364 gataaaaatcacacagggacgcaaattacctctaaattttctacaagaatgtctacaaaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gataaaaatcacacagggacgcaaattacctctaaattttctacaagaatgtctacaaaa 623
Query: 424 ccaaaatagtacagtgccagccacttgagacaagacttcactgaaagaatcataaagaca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccaaaatagtacagtgccagccacttgagacaagacttcactgaaagaatcataaagaca 683
Query: 484 tttatctatctatctatctatctatctatctatctatctatctatctatctatctat 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tttatctatctatctatctatctatctatctatctatctatctatctatctatctat 740
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 109
Number of extensions: 43
Number of successful extensions: 43
Number of sequences better than 10.0: 1
Number of HSP's gapped: 40
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no113_i02.g1 MSMg01no113_i02.g1 CHROMAT_FILE:
MSMg01no113_i02.g1 PHD_FILE: MSMg01no113_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:18:57 2005
(563 letters)
>mm_chr16_44915747_44916711
Length = 965
Score = 640 bits (331), Expect = 0.0
Identities = 345/350 (98%), Gaps = 2/350 (0%)
Strand = Plus / Minus
Query: 1 ttgttcactctttgct-antcattttctctttgacctgagaagagaaag-agatggggaa 58
|||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 350 ttgttcactctttgctaagtcattttctctttgacctgagaagagaaagtagatggggaa 291
Query: 59 gagagagtagatgggtcattcacagcatatctgatggtaagcacaaagcttttgcctata 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gagagagtagatgggtcattcacagcatatctgatggtaagcacaaagcttttgcctata 231
Query: 119 tagtcatatcacatgactggcaactgtacattttttattggatattttatgtatctacat 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 230 tagtcatatcacatgactggcaactgtacattttttattggatattttatgtatttacat 171
Query: 179 ttcaaatgttgtctccttttccagtttcccctccagaataccctcttccattctcctttc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ttcaaatgttgtctccttttccagtttcccctccagaataccctcttccattctcctttc 111
Query: 239 tcctgcatctatgaggatgcttcctacctactcactcccacctcactgccctggcattct 298
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 110 tcctgcatctatgaggatgcttcctacctactcactcccacgtcactgccctggcattct 51
Query: 299 cttacactagggaatcaagcctttactggaccaagggtttctccttccac 348
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 cttacactagggaatcaagcctttactggaccaagggtttctccttccac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 965
Length adjustment: 10
Effective length of query: 553
Effective length of database: 955
Effective search space: 528115
Effective search space used: 528115
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
