Query= MSMg01no118_a24.b1 MSMg01no118_a24.b1 CHROMAT_FILE:
MSMg01no118_a24.b1 PHD_FILE: MSMg01no118_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:48 2005
(596 letters)
>mm_chr16_95471609_95472598
Length = 990
Score = 1019 bits (527), Expect = 0.0
Identities = 577/597 (96%), Gaps = 7/597 (1%)
Strand = Plus / Plus
Query: 1 agccttactgtaaccccctcccccccagcctgaaatctgactgatctggtctgactgtta 60
||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||
Sbjct: 200 agccttactgtaacccccttccccccagcctgaaatctgactgatcaggtttgactgtta 259
Query: 61 gcaccaggagagcatcaggggtggagcctgccaccctat-ggtctgccactcccactgct 119
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 260 gcaccaggagagcatcaggggtggagcctgtcaccctataggtctgccactcccactgct 319
Query: 120 actacctgccgcctagctgttccggagccaacacgtggtcacctgcaactggactccaag 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 320 actacctgccgcctagctgttccggagccaacacgtggtcacctgcaactggactccatg 379
Query: 180 gatgatttggtgggaatgggcacctcccccctcttcataaccccatgtctccgaatagta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gatgatttggtgggaatgggcacctcccccctcttcataaccccatgtctccgaatagta 439
Query: 240 aaattgaaccttgatcagactaatgttttggttccatctattctcgtgccgcctagttcc 299
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 440 aaattgaaccttgatcagactaatgtcttggttccatcttttctcgtgccgcctagttcc 499
Query: 300 ctcttttcttccaggttccaagatgccttccaggcttgaacccagacatgtgagcttctg 359
|||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 500 ctcttttcttccagattccaagatgcctcccaggctcgaacccagacatgtgagcttctg 559
Query: 360 gccggctccaacaccttacagtgtcacaaataccactgcctaacaaatgcacacaggaaa 419
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 560 gccagctccaacaccttacagtgtcacaaataccactgcctaacaaatacacacaggaaa 619
Query: 420 gttcagaagggaagtcagccagagattagagtgaaagtcatttggagaaggacaagtcct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gttcagaagggaagtcagccagagattagagtgaaagtcatttggagaaggacaagtcct 679
Query: 480 cactcaggtccactgtgggttagagtggccacaagaacaaagcaggccagaaggacaggg 539
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 680 cactcaggtccactgtgggttagagtggccacaagaacaaatcaggccagaaggacaggg 739
Query: 540 caagaggcacaggaagaggaagaggcagtatctctccttctgtatgtgaccaaaaat 596
||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 740 caagaggcacaggaagagg------cagtatctctccttctgtatgtgaccaaaaat 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 990
Length adjustment: 10
Effective length of query: 586
Effective length of database: 980
Effective search space: 574280
Effective search space used: 574280
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no118_a24.g1 MSMg01no118_a24.g1 CHROMAT_FILE:
MSMg01no118_a24.g1 PHD_FILE: MSMg01no118_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:48 2005
(237 letters)
>mm_chr16_95605909_95606542
Length = 634
Score = 443 bits (229), Expect = e-129
Identities = 234/237 (98%), Gaps = 3/237 (1%)
Strand = Plus / Minus
Query: 1 caggagtccaacacaagcatacagaaacatgatgtgatgggcgaggtcaccaggagtgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 caggagtccaacacaagcatacagaaacatgatgtgatgggcgaggtcaccaggagtgct 375
Query: 61 tggtagggtgacaaagcaagatgaagattgtgtcagcagccattgtagcctcctaggtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tggtagggtgacaaagcaagatgaagattgtgtcagcagccattgtagcctcctaggtag 315
Query: 121 ggagaaggggcaaggtgagagggcagtgttaccctgtaagagaccacgttagaaaggaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ggagaaggggcaaggtgagagggcagtgttaccctgtaagagaccacgttagaaaggaag 255
Query: 181 ctttctacataccttctgttacttgagaaaaacagaactctgatgataaaacctcaa 237
||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 254 ctttctacataccttctgt---ttgagaaaaacagaactctgatgataaaacctcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 634
Length adjustment: 9
Effective length of query: 228
Effective length of database: 625
Effective search space: 142500
Effective search space used: 142500
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
