Query= MSMg01no120_i11.b1 MSMg01no120_i11.b1 CHROMAT_FILE:
MSMg01no120_i11.b1 PHD_FILE: MSMg01no120_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:00 2005
(509 letters)
>mm_chr16_42969328_42970237
Length = 910
Score = 963 bits (498), Expect = 0.0
Identities = 507/510 (99%), Gaps = 1/510 (0%)
Strand = Plus / Minus
Query: 1 aaaaaaagg-aaacatgtaattaaatgatgaaattggttgtgcaatatatacaaaactat 59
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 aaaaaaaggcaaacatgtaattaaatgatgaaattggttgtgcaatatatacaaaactat 651
Query: 60 tttaaaaattaagtttacacagatgctaacattatttgtgtgctacacagccacaaatta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 tttaaaaattaagtttacacagatgctaacattatttgtgtgctacacagccacaaatta 591
Query: 120 ccaaacatagttctatgtgtctaaatagagagaatttcagggttaaattttgaatctcaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ccaaacatagttctatgtgtctaaatagagagaatttcagggttaaattttgaatctcaa 531
Query: 180 gccaatttgtagttataagtgtaagagggtcaaagacctacaaggaaagcctacataaat 239
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 530 gccaatttgtagttataagtgtaagagggtcaaggaactacaaggaaagcctacataaat 471
Query: 240 gcttatatggtttaacttattacctagcaagaacaaagaaaatactaaataccctttatt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gcttatatggtttaacttattacctagcaagaacaaagaaaatactaaataccctttatt 411
Query: 300 ctgaaggtgccagcaaaccaattaacatctttcaataagaaaacttataccttgtgtaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ctgaaggtgccagcaaaccaattaacatctttcaataagaaaacttataccttgtgtaaa 351
Query: 360 taatgacttgaaaatgtaaattaatgaatgaaaaagtattatacaacaggatggcaacat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 taatgacttgaaaatgtaaattaatgaatgaaaaagtattatacaacaggatggcaacat 291
Query: 420 atttggccatatacatttttatagagtaaatggtatataaataaataaaaacactgtaat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 atttggccatatacatttttatagagtaaatggtatataaataaataaaaacactgtaat 231
Query: 480 cctcaaatattattgcatttatttatttgg 509
||||||||||||||||||||||||||||||
Sbjct: 230 cctcaaatattattgcatttatttatttgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 910
Length adjustment: 10
Effective length of query: 499
Effective length of database: 900
Effective search space: 449100
Effective search space used: 449100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no120_i11.g1 MSMg01no120_i11.g1 CHROMAT_FILE:
MSMg01no120_i11.g1 PHD_FILE: MSMg01no120_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:00 2005
(244 letters)
>mm_chr16_42877587_42878230
Length = 644
Score = 464 bits (240), Expect = e-135
Identities = 243/244 (99%)
Strand = Plus / Plus
Query: 1 catttgcagaactttgtgtctgaggtcaaaaggtgctgaaataaacctgtgaggagaaga 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 catttgcagaactttgtgtctgaggtcaaacggtgctgaaataaacctgtgaggagaaga 260
Query: 61 aattggagttttctggaagtctctgagctgcccagagagtgaggcaatcaggcattgggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattggagttttctggaagtctctgagctgcccagagagtgaggcaatcaggcattgggg 320
Query: 121 ctttgattcaggtcttagatgacagaagtacaagcatttcagctatgaagagcaggttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttgattcaggtcttagatgacagaagtacaagcatttcagctatgaagagcaggttga 380
Query: 181 caggtatacccccaccaggctccagagcaataatgccttttcctgatgaccttctagtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caggtatacccccaccaggctccagagcaataatgccttttcctgatgaccttctagtgt 440
Query: 241 ttat 244
||||
Sbjct: 441 ttat 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
