Query= MSMg01no125_h17.b1 MSMg01no125_h17.b1 CHROMAT_FILE:
MSMg01no125_h17.b1 PHD_FILE: MSMg01no125_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:32 2005
(432 letters)
>mm_chr16_9858359_9859190
Length = 832
Score = 654 bits (338), Expect = 0.0
Identities = 407/458 (88%), Gaps = 44/458 (9%)
Strand = Plus / Plus
Query: 1 ggaaagcttgaggctttgtgatcccagggcatggttgatgctgccagtcctgcaaacatg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 ggaaagcttgaggctttgtgatcccagggcatggttgatgctgccagtcctggaaacatg 260
Query: 61 ttcagggaccactgcactcagggtcggtggacttctgactgctgcttccagggaaaggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcagggaccactgcactcagggtcggtggacttctgactgctgcttccagggaaaggtg 320
Query: 121 gtaactacgaggtcatttgctacaagcactccctctcttgagtcactgagatcaagggtc 180
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 gtatctacgaggtcatttgctacaagcactctctctcttgagtcactgagatcaagggtc 380
Query: 181 cctctgaacattaccagacctccccactcctgaccacttgtatggataatgggacaccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 cctctgaacattaccagacctccccactcctgaccacttgtatggataatgggacactac 440
Query: 241 taccttagcaagctgaacaacagaaatgcattgttttaatagttctggaggccacattca 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 taccttagcaagctgaacaacaggaatgcattgttttaatagttctggaggccacattca 500
Query: 301 agttcttggga--------------------------ggatggtctatcccagaactctc 334
||||||||||| |||||||||||||||| ||||||
Sbjct: 501 agttcttgggaagtcagttcctaatggagagactggaggatggtctatcccaggactctc 560
Query: 335 tctactctttggcctgtagtcagcttcatcatttatactataacactcatttatactata 394
|||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctattctttggcctgtagtcagcttcatcatttatactataacactca----------- 609
Query: 395 acactcagttggctcacacctgcaatgctagcatttag 432
|||||||||||||||||||||||||||||||
Sbjct: 610 -------gttggctcacacctgcaatgctagcatttag 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_h17.g1 MSMg01no125_h17.g1 CHROMAT_FILE:
MSMg01no125_h17.g1 PHD_FILE: MSMg01no125_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:32 2005
(244 letters)
>mm_chr16_9989905_9990548
Length = 644
Score = 449 bits (232), Expect = e-131
Identities = 241/244 (98%)
Strand = Plus / Minus
Query: 1 ctcccaggtgacctgggaatgtggcttgagattgggagggttgtgtagcctttggatctt 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 444 ctcccaggtgacctgggaatgtggcttgagattgggagggctgtgtagcctttggatctt 385
Query: 61 tcttctgactatgaggtggcaagtatgctgggaagggtctctcttgattcaccggaccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcttctgactatgaggtggcaagtatgctgggaagggtctctcttgattcaccggaccca 325
Query: 121 atgaaagcacaccttggtatgttatggccttggctaccaagcaaccttgatccataaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atgaaagcacaccttggtatgttatggccttggctaccaagcaaccttgatccataaaat 265
Query: 181 attgttctctgatgatctagctgtcatggcatcttcttaagagtgctctttagatgaaaa 240
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agtggtctctgatgatctagctgtcatggcatcttcttaagagtgctctttagatgaaaa 205
Query: 241 aaag 244
||||
Sbjct: 204 aaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
