Query= MSMg01no125_m15.b1 MSMg01no125_m15.b1 CHROMAT_FILE:
MSMg01no125_m15.b1 PHD_FILE: MSMg01no125_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:56 2005
(330 letters)
>mm_chr16_62135256_62135985
Length = 730
Score = 538 bits (278), Expect = e-157
Identities = 305/314 (97%), Gaps = 2/314 (0%)
Strand = Plus / Minus
Query: 5 gaattcca-tcaatttaaagatcgaatattgattgtatatgtatgtaccactctggctta 63
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gaattccattcaatttaaaga-cgaatattgattgtatatgtatgtaccactctggctta 459
Query: 64 cattacacattaccttaatgagaaactattgagagagatactataaaagagaaaatattt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 cattacacattaccttaatgagaaactattgagagagatactataaaagagaaaatattt 399
Query: 124 atttggacatacagataagattgcattctattattgcttatttcctatagtaagactgaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 atttggacatacagataagattgcattctattattgcttatttcctatagtaagactgaa 339
Query: 184 tatcataatgaatagcaagggccagtacagttctgcttacctcatagaatccaggtatca 243
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 338 tatcataatgaatagcaagagccagtatagttctgcttacctcatagaatccaggtatca 279
Query: 244 caaaataggacaaagggactggaaattccaatattcttttcaaaggcatagtccaagtgc 303
|||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||| |
Sbjct: 278 caaaataggaggaagggactggaaattctaatattcctttcaaaggcatagtccaagtac 219
Query: 304 caaccttttgcttt 317
||||||||||||||
Sbjct: 218 caaccttttgcttt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_m15.g1 MSMg01no125_m15.g1 CHROMAT_FILE:
MSMg01no125_m15.g1 PHD_FILE: MSMg01no125_m15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:56 2005
(135 letters)
>mm_chr16_62051099_62051634
Length = 536
Score = 248 bits (128), Expect = 1e-70
Identities = 134/136 (98%), Gaps = 1/136 (0%)
Strand = Plus / Plus
Query: 1 tggactc-ctaattgttaaggaaaatagaaaaggtactttaaccctatgttcataaacat 59
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggactcactaattgttaaggaaaatagaaaaggtactttaaccctatgttcataaacat 260
Query: 60 aaattgaattgtttgtgaaatgcaaaatgtgcttcgggttaaaaatttgaggggaaaata 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaattgaattgtttgtgaaatgcaaaatgtgcttcgggttaaaaatttgaggggaaaata 320
Query: 120 aaaaggatgctagatg 135
||||||||| ||||||
Sbjct: 321 aaaaggatgatagatg 336
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 135
Length of database: 536
Length adjustment: 8
Effective length of query: 127
Effective length of database: 528
Effective search space: 67056
Effective search space used: 67056
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
