Query= MSMg01no127_k14.b1 MSMg01no127_k14.b1 CHROMAT_FILE:
MSMg01no127_k14.b1 PHD_FILE: MSMg01no127_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:29 2005
(311 letters)
>mm_chr16_43172841_43173552
Length = 712
Score = 567 bits (293), Expect = e-166
Identities = 305/309 (98%), Gaps = 1/309 (0%)
Strand = Plus / Minus
Query: 4 ggaattctccc-ttgcttaacacagagaatgagaatttggcctgtgctctataggcacca 62
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ggaattctcccactgattaacacagagaatgagaatttggcctgtgctctataggcacca 453
Query: 63 ttgaaatgtggccacctgaggcatgtagggagggcatccagctggcacaccacatgttgc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ttgaaatgtggccacctgaggcatgtagggagggcatccagctggcacaccacatgttgc 393
Query: 123 cctggagtagtgtacaatgagagagagattttggctaagaatacctgggcaatctctaca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cctggagtagtgtacaatgagagagagattttggctaagaatacctgggcaatctctaca 333
Query: 183 aaggtcctgattatgaaaagaacttcggcatcatcattgtctcatgagtgtaatatgagc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 aaggtcctgattatgaaaagaacttcggcatcatcattgtctcatgagtgtaatatgagc 273
Query: 243 caaagaaacttctctttctatgtttatatattatcaagaaaagaaaaaaagaagctctta 302
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 272 caaagaaacttctctttctatgtttatatattaccaagaaaagaaaaaaagaagctctta 213
Query: 303 taggaacaa 311
|||||||||
Sbjct: 212 taggaacaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 712
Length adjustment: 9
Effective length of query: 302
Effective length of database: 703
Effective search space: 212306
Effective search space used: 212306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no127_k14.g1 MSMg01no127_k14.g1 CHROMAT_FILE:
MSMg01no127_k14.g1 PHD_FILE: MSMg01no127_k14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:29 2005
(342 letters)
>mm_chr16_43096697_43097439
Length = 743
Score = 648 bits (335), Expect = 0.0
Identities = 341/343 (99%), Gaps = 1/343 (0%)
Strand = Plus / Plus
Query: 1 tatgtccattccagcctctgaaaa-ttccttaaaagatacttaaaccataaggttcttgt 59
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 tatgtccattccagcctctgaaaaattccttaaaagatacttaaaccataaggttcttgt 260
Query: 60 gagaagcctgcagttttcatgatcagtgctgtgttcagtatgtagtaagtacaatgacat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagaagcctgcagttttcatgatcagtgctgtgttcagtatgtagtaagtacaatgacat 320
Query: 120 gtactcactagacactactgttttgctttgagtgactaaatgttattcattttttgatca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtactcactagacactactgttttgctttgagtgactaaatgttattcattttttgatca 380
Query: 180 cacacatggttgtgggtgtcaaatacctttgtaatctcaggaatacaggtagtgaagcag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacacatggttgtgggtgtcaaatacctttgtaatctcaggaatacaggtagtgaagcag 440
Query: 240 ccccccacccaggcttgtacgtagcacttgcatggtcaatgcttactggaaacagagagt 299
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 ccccccacccaggcttgtacgtagcacttgtatggtcaatgcttactggaaacagagagt 500
Query: 300 ctcgctattcagtttcctcaattcaactatgacaaaaatgtgg 342
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcgctattcagtttcctcaattcaactatgacaaaaatgtgg 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 743
Length adjustment: 9
Effective length of query: 333
Effective length of database: 734
Effective search space: 244422
Effective search space used: 244422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
