Query= MSMg01no127_k20.b1 MSMg01no127_k20.b1 CHROMAT_FILE:
MSMg01no127_k20.b1 PHD_FILE: MSMg01no127_k20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:30 2005
(285 letters)
>mm_chr16_7728071_7728755
Length = 685
Score = 528 bits (273), Expect = e-154
Identities = 282/285 (98%)
Strand = Plus / Minus
Query: 1 atggaagcaaagagctctatgctctttttctagcaacaggctttgcctaggagaggctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 atggaagcaaagagctctatgctctttttctagcaacaggctttgcctaggagaggctga 426
Query: 61 aaccagaaggcttggactcacccaaaagagtacatgggaaagttcaatcatccgtggcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 aaccagaaggcttggactcacccaaaagagtacatgggaaagttcaatcatccgtggcat 366
Query: 121 cctgccaaggcagacagcactcctggaaatattttatctctgaaaataaaaatcaattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cctgccaaggcagacagcactcctggaaatattttatctctgaaaataaaaatcaattta 306
Query: 181 gtggactagaagataatgtagtattcacagatgtaccatttttcttccaacacaattccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gtggactagaagataatgtagtattcacagatgtaccatttttcttccaacacaattccc 246
Query: 241 caattctgctaaatttttcagttggcaggggcaggatagaagaag 285
||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 245 caattctgctaaagggttcagttggcaggggcaggatagaagaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no127_k20.g1 MSMg01no127_k20.g1 CHROMAT_FILE:
MSMg01no127_k20.g1 PHD_FILE: MSMg01no127_k20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:30 2005
(149 letters)
>mm_chr16_7639186_7639734
Length = 549
Score = 265 bits (137), Expect = 9e-76
Identities = 146/149 (97%)
Strand = Plus / Plus
Query: 1 aggctgccacaggaacacagaaaggatctgggagtgaaaggatgtctgtgctttgctttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggctgccacaggaacacagaaaggatctgggagtgaaaggatgtctgtgctttgctttc 260
Query: 61 tctcagtacctgatctgagacgcatagagaaaacgcctccccgcttatatttaccttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctcagtacctgatctgagacgcatagagaaaacgcctccccgcttatatttaccttctt 320
Query: 121 ggttcctttctttagtgttcatctaaatg 149
|||||||||| ||||||||||||||||
Sbjct: 321 ggttcctttccaaagtgttcatctaaatg 349
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 149
Length of database: 549
Length adjustment: 8
Effective length of query: 141
Effective length of database: 541
Effective search space: 76281
Effective search space used: 76281
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
