Query= MSMg01no128_n15.b1 MSMg01no128_n15.b1 CHROMAT_FILE:
MSMg01no128_n15.b1 PHD_FILE: MSMg01no128_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:05 2005
(247 letters)
>mm_chr16_18485433_18486079
Length = 647
Score = 470 bits (243), Expect = e-137
Identities = 246/247 (99%)
Strand = Plus / Minus
Query: 1 atgtggtttttcttttttctctctctctatatataaatggaaggcctcttcgggtaagaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 447 atgtggtttttcttttttctctctctctatatataaatggaaggcctctttgggtaagaa 388
Query: 61 aaaccaccctttcagatgacaggatggacattctgcagacaccctgagcaggtgcctcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aaaccaccctttcagatgacaggatggacattctgcagacaccctgagcaggtgcctcac 328
Query: 121 cttggcaagtatttggaaaaatattcaggaagggagaccctgcactgactactacccaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cttggcaagtatttggaaaaatattcaggaagggagaccctgcactgactactacccaat 268
Query: 181 aggaggcaaagccaaccaaggcagagggctaaagcacatttctgggctatgacagccaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aggaggcaaagccaaccaaggcagagggctaaagcacatttctgggctatgacagccaca 208
Query: 241 taaaaca 247
|||||||
Sbjct: 207 taaaaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no128_n15.g1 MSMg01no128_n15.g1 CHROMAT_FILE:
MSMg01no128_n15.g1 PHD_FILE: MSMg01no128_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:05 2005
(231 letters)
>mm_chr16_18250737_18251367
Length = 631
Score = 371 bits (192), Expect = e-107
Identities = 228/250 (91%), Gaps = 19/250 (7%)
Strand = Plus / Plus
Query: 1 ttcctggtcggagttggggtagacggcaaggacaacacggttggctgccgccttggcaag 60
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 201 ttcctggtcggagttggggtagacggcaaggacaacacagttggctgccggcttggcaag 260
Query: 61 tacaagggtggaacatgtgctgtggcagctccctttgacactgtgcacattccagaggcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacaagggtggaacatgtgctgtggcagctccctttgacactgtgcacattccagaggcc 320
Query: 121 actaagcaggtggtgaaggccttccaggaattcatccggtggg---ct--cct-----tg 170
||||||||||||||||||||||||||||||||||||||||||| || ||| ||
Sbjct: 321 actaagcaggtggtgaaggccttccaggaattcatccggtggggaccttgcctggggctg 380
Query: 171 g---------aagtccctgatccatctgggacaaggggggtagcccctgcactggcagtt 221
| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 ggcttctgggaagtccctgatccatctgggacaaggggggtggcccctgcactggcagtt 440
Query: 222 gtggatgtgg 231
||||||||||
Sbjct: 441 gtggatgtgg 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space: 138084
Effective search space used: 138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
