Query= MSMg01no130_e01.b1 MSMg01no130_e01.b1 CHROMAT_FILE:
MSMg01no130_e01.b1 PHD_FILE: MSMg01no130_e01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:57 2005
(410 letters)
>mm_chr16_35631021_35631833
Length = 813
Score = 706 bits (365), Expect = 0.0
Identities = 400/413 (96%), Gaps = 3/413 (0%)
Strand = Plus / Minus
Query: 1 ctatggtacttgaactctgcagccagatggacaagacgtagagcttggggattacctggg 60
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||
Sbjct: 613 ctatggtacttgaactctgcagccagatgggcaagatgtagagcttggggattacgtggg 554
Query: 61 tggtagacccacttggtcagagtgtagcag---agtgttcaggattagagactagactgt 117
|||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||
Sbjct: 553 tggtagacccacttggtcagagtgtagcagaacagagttcaggtttagagactagactgt 494
Query: 118 agctgagagaggaaggattcccagctccaccgtcggctggggcctggtgggcctccgtgt 177
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 493 agctgagagaggaaggattcccagctccaccgtcggctggggcctggtgggcctccatat 434
Query: 178 ctctgtctgtaaaatggggaactagttcatgcctggcttcctcatggtccacgggagaca 237
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 433 ctctgtctgtaaaatggggaactagttcatgcctggcttcctcatggtccccgggagaca 374
Query: 238 catttaaagtctttattatgttaagcggatgtagcctggtttttccaaagcatccttttc 297
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 373 catttaaagtctttattatggcaagcggatgtagcctggtttttccaaagcatccttttc 314
Query: 298 gcctcttcgatctgcctttggcccatccctcttcaggttcctggactctttaggaataat 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gcctcttcgatctgcctttggcccatccctcttcaggttcctggactctttaggaataat 254
Query: 358 taatctaggaagccctggccacctcagccccgctgagacgaaacgaggagaca 410
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 taatctaggaagccctggccacctcagccccgctgagacgaaacgaggagaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 813
Length adjustment: 9
Effective length of query: 401
Effective length of database: 804
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no130_e01.g1 MSMg01no130_e01.g1 CHROMAT_FILE:
MSMg01no130_e01.g1 PHD_FILE: MSMg01no130_e01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:58 2005
(237 letters)
>mm_chr16_35509113_35509749
Length = 637
Score = 406 bits (210), Expect = e-118
Identities = 222/226 (98%)
Strand = Plus / Plus
Query: 1 cccttcttgtcatcgcctctctctgctgctgtggctgctgcaggcctcaggtcccaccca 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cccttcttgtcatcgcgtctctctgctgctgtggctgctgcaggcctcaggtcccaccca 260
Query: 61 ggtccccatctctcacccctgagtcaggtaggacagtccaggcttcttacgatccctcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtccccatctctcacccctgagtcaggtaggacagtccaggcttcttacgatccctcca 320
Query: 121 tctatggaggcttcacctttctagatctttcctcagctgtaaaggtgtccttgccactct 180
||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 321 tctctggaggcttcacctttctagatctgtcctcagctgtaaaggtgtcctcgccactct 380
Query: 181 ctcgcagcctgttctgcagtacatctcttcctgctcctctccggag 226
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcgcagcctgttctgcagtacatctcttcctgctcctctccggag 426
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
