Query= MSMg01no130_n19.b1 MSMg01no130_n19.b1 CHROMAT_FILE:
MSMg01no130_n19.b1 PHD_FILE: MSMg01no130_n19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:52 2005
(390 letters)
>mm_chr16_73091400_73092189
Length = 790
Score = 739 bits (382), Expect = 0.0
Identities = 388/390 (99%)
Strand = Plus / Minus
Query: 1 tggggaaaaacaaaatcgctgtccttttatttttttaataactgctaaataataaataca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 590 tggggaaaaacaaaatcgctgtccttttatttttttaataactgctaaataataaatata 531
Query: 61 tgtaacaaaaccttcaaaacatatatggcaaagcttagatttttttattagattctatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tgtaacaaaaccttcaaaacatatatggcaaagcttagatttttttattagattctatca 471
Query: 121 attaaatccatatgttactggaagatggctttactttagttttacaatccaggctctctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 attaaatccatatgttactggaagatggctttactttagttttacaatccaggctctctt 411
Query: 181 gtatatattataaacatactcatgtaagatatatatcagtagcactacaagagattatta 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 410 gtatatattataaacatactcatgtaagatatatatcagtagcactataagagattatta 351
Query: 241 tgcatattggatagtcaatgtttggttcccaaatgagtaatgttaggcaaaatcaaaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tgcatattggatagtcaatgtttggttcccaaatgagtaatgttaggcaaaatcaaaaac 291
Query: 301 atacttttagagtctcaaaacaaaggggattcatgctggagacatgtgtagttgtgtgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 atacttttagagtctcaaaacaaaggggattcatgctggagacatgtgtagttgtgtgca 231
Query: 361 gaataagatgtgaacattatttttttaagt 390
||||||||||||||||||||||||||||||
Sbjct: 230 gaataagatgtgaacattatttttttaagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space: 297561
Effective search space used: 297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no130_n19.g1 MSMg01no130_n19.g1 CHROMAT_FILE:
MSMg01no130_n19.g1 PHD_FILE: MSMg01no130_n19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:52 2005
(333 letters)
>mm_chr16_72946459_72947191
Length = 733
Score = 569 bits (294), Expect = e-166
Identities = 324/334 (97%), Gaps = 4/334 (1%)
Strand = Plus / Plus
Query: 2 ccctttgagagtgctagatggttatttcagaattcagaaccacagtgaaaaatcaggtca 61
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 202 ccctttgagagtgctagatggttatttcagaattcagaattacagtgaaaaatcaggtca 261
Query: 62 attgatcaatcggtacttaagaagccatataagtataagtactgtagattttactgacag 121
|||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 262 attgatcaattggtacttaagaagctatataagtataagtactgtagattttactgacaa 321
Query: 122 aagtaagttacaaactttaaaactgtctttcaaaaaacaaatcctggaaaaagaaagacc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aagtaagttacaaactttaaaactgtctttcaaaaaacaaatcctggaaaaagaaagacc 381
Query: 182 taactgataaatgtgaggtttgcatcacagagttcactgaatggagccttagcaacacag 241
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 382 taactgataaatgtgaggtttgcatcacagatttcactgaatggagccttagcaacacag 441
Query: 242 cagatctttgtgtaaggggg-tcacatgcttgttttagaactcatataatatctaggta- 299
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cagatctttgtgtaaggggggtcacatgcttgttttagaactcatataatatctaggtat 501
Query: 300 aaaaaagtaatgaggaaaaaaaaaacctaaaagc 333
|||||||||||||| ||||||||||| |||||||
Sbjct: 502 aaaaaagtaatgag-aaaaaaaaaac-taaaagc 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
