Query= MSMg01no131_p17.b1 MSMg01no131_p17.b1 CHROMAT_FILE:
MSMg01no131_p17.b1 PHD_FILE: MSMg01no131_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:22 2005
(299 letters)
>mm_chr16_13603963_13604660
Length = 698
Score = 493 bits (255), Expect = e-144
Identities = 288/299 (96%), Gaps = 1/299 (0%)
Strand = Plus / Plus
Query: 1 aagagcactgactgctcttctaaagaactggggacagaggctcacaactgtctgcaacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagagcactgactgctcttctaaagaactggggacagaggctcacaactgtctgcaacta 260
Query: 61 cggtatcaagggatccgatgctttcttctgacctccagggtactgcacacacatggtgct 120
||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 261 aggtatcaagggatccaatgctctcttctgacctccagggtactgcacatacatggtgct 320
Query: 121 aacatgtgtgctaacagaaatgcagagaaaacaaccatatagatttttttcagtgaatca 180
|||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||
Sbjct: 321 aacatgtgtgctaacagaaatgcagacaaaacacccatatagatttttttcaatgaatca 380
Query: 181 taataaaagaacccagtggtaaatgcattttcattcacttccatctgatttctctatgtt 240
||||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 381 taataaa-gtacccagtggtaaatgcatcttccttcacttccatctgatttctctatgtt 439
Query: 241 gcttttaaaaaagtattacgtatgcaagatcctattccatatcctccttttaatctaag 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gcttttaaaaaagtattacgtatgcaagatcctattccatatcctccttttaatctaag 498
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 698
Length adjustment: 9
Effective length of query: 290
Effective length of database: 689
Effective search space: 199810
Effective search space used: 199810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no131_p17.g1 MSMg01no131_p17.g1 CHROMAT_FILE:
MSMg01no131_p17.g1 PHD_FILE: MSMg01no131_p17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:22 2005
(289 letters)
>mm_chr16_13740545_13741233
Length = 689
Score = 520 bits (269), Expect = e-152
Identities = 284/289 (98%)
Strand = Plus / Minus
Query: 1 ctgttctgacttgagcattaaattttgcctcctagattattttggaccgttctggaaact 60
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 489 ctgttctgacttgagcattaaattttgcctcctagattattttggaatgttctggaaact 430
Query: 61 ttaggtattgggacctacttgaggaagtatgtcccagagggtgtacttttgaatacatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ttaggtattgggacctacttgaggaagtatgtcccagagggtgtacttttgaatacatcc 370
Query: 121 cctggattgctgtttctctgcactatgtgtcctgctgctatgaaatgaacagttgcttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 369 cctggattgctgtttctctgcactatgtgtcctgctgctatgaaatgaacagttgtttcc 310
Query: 181 atttccacactctcccaacttccttcatgactggcacgggcccagaatgttcggagctaa 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 309 atttccacactctcccaacttccttcatgactggcacaggcccagaatgttcggagctaa 250
Query: 241 gaactctttgaaactgtgagtcaaaatcacctttgcctttttagtttgc 289
||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 249 gaactctttgaaactgtgagtcaaaatcacctttgtctttttagtttgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
