Query= MSMg01no132_c18.b1 MSMg01no132_c18.b1 CHROMAT_FILE:
MSMg01no132_c18.b1 PHD_FILE: MSMg01no132_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:36 2005
(581 letters)
>mm_chr16_24377256_24378237
Length = 982
Score = 1029 bits (532), Expect = 0.0
Identities = 568/580 (97%), Gaps = 2/580 (0%)
Strand = Plus / Plus
Query: 4 gaattctgttcacttccca-tcatataatgtatgcacatgcaggtgacagggtactttgg 62
|||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||
Sbjct: 204 gaattctgttcacttctaagtcatataatgtatgcacatgcaggtgacagggcactttgg 263
Query: 63 atctagtagatgaatgaaatgaatttgcaacatgttagcatctgctcttaggacaaatgt 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 264 atctagtagatgaatgaaatgaatttgcaacatgttagcatctgctcttaggacaaatat 323
Query: 123 cttgagcaaagctctgtgaagtccaccttgtattcaagaatccatcaggaaccagtctca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cttgagcaaagctctgtgaagtccaccttgtattcaagaatccatcaggaaccagtctca 383
Query: 183 gcagcatccaggacagacagcctgctgtcctgccacatgtccaggctttgctctgttcct 242
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gcagcatccaggacagacggcctgctgtcctgccacatgtccaggctttgctctgttcct 443
Query: 243 gtcttttgcacaatcttcttcccattttaatccaaaatttgtcacttctattgcctctgc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtcttttgcacaatcttcttcccattttaatccaaaatttgtcacttctattgcctctgc 503
Query: 303 ctgcataagttcatttttttcttatttctgccctattctatgctagcttcaacgaactat 362
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 504 ctgcataagttcatttttttcttatttctgccctattctacgctagcttcaacgaactat 563
Query: 363 ttggaatccctcgattctactgtgatctcccagtgctgtctgtgtgtatgctgcatgctt 422
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttggaatccctcgactctactgtgatctcccagtgctgtctgtgtgtatgctgcatgctt 623
Query: 423 tccctggagtgcagttcactattttaccacttcttcatatgatacttctgttttaggtct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tccctggagtgcagttcactattttaccacttcttcatatgatacttctgttttaggtct 683
Query: 483 cacttgactgattgtttctttttctgatttttgttgttgttttgtttttctttttaagat 542
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 684 cacttgactgattgtttctttttctgatttttgttgttgttttgttttgctttttaagat 743
Query: 543 tttttttt-gctatgactgtgtgtgtgtgtgtgtgtgtgt 581
|||||||| ||| ||| |||||||||||||||||||||||
Sbjct: 744 tttttttttgctttgagtgtgtgtgtgtgtgtgtgtgtgt 783
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 982
Length adjustment: 10
Effective length of query: 571
Effective length of database: 972
Effective search space: 555012
Effective search space used: 555012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_c18.g1 MSMg01no132_c18.g1 CHROMAT_FILE:
MSMg01no132_c18.g1 PHD_FILE: MSMg01no132_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:37 2005
(632 letters)
>mm_chr16_24579123_24580154
Length = 1032
Score = 822 bits (425), Expect = 0.0
Identities = 431/433 (99%)
Strand = Plus / Minus
Query: 200 catgcagtgcacacatcataacctttgctaaggaatatcttaaatgctgtcaccctcaca 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1032 catgcagtgcacacatcataacctttgctaaggaatatcttaaatgctgtcaccctcaca 973
Query: 260 taaaaaaacctaactagtggggcaatcgatctcttcactagcttgtcaccatgtttctca 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972 taaaaaaacctaactagtggggcaatcgatctcttcactagcttgtcaccatgtttctca 913
Query: 320 gtgtaagacatattaaaatatactgtccatcttaaaaatataaacttcatattacaatca 379
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 912 gtgtaagacatattaaaatatactgtccatcttaaagatataaacttcatattacaatca 853
Query: 380 cacaagaataaggctggaaatgtttttaaataaaaataaaaacttttcagagacaagagc 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 cacaagaataaggctggaaatgtttttaaataaaaataaaaacttttcagagacaagagc 793
Query: 440 aagagatgagagaattgaagggatggcaacaactcaggctagtcttccctgcatctgcac 499
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 aagagatgagagaatttaagggatggcaacaactcaggctagtcttccctgcatctgcac 733
Query: 500 tctgcctacatagtcactgctgcctgattacctccaacacttgctggaacatgttctggg 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tctgcctacatagtcactgctgcctgattacctccaacacttgctggaacatgttctggg 673
Query: 560 gtattgaccacaactaaagccttgcgatttcacagctatggcataaaatgtttggccaac 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gtattgaccacaactaaagccttgcgatttcacagctatggcataaaatgtttggccaac 613
Query: 620 cacatgcacatta 632
|||||||||||||
Sbjct: 612 cacatgcacatta 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
