CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTTGTTCTTCTCCTGATCCCATTTTTAATAAGGTTATTTGATTCTCCA
GAGTCTACCTTTTTGATTTCTCTGATATATTGGATATTAGTCCTCTATCA
AATATAGGAATGGTGAAGATCTTTTTGCAAACTGTAGGTTGCCATTTTAT
CCTATTGACAGTTTCCATTTCCTTACAAAAGCTTTGCAATTTGATGAGGT
CCCACTTGTCTATTGTTGATAATAGCATAAGCTATTGGTGTTCTGTTCTA
TTTATTTATAAACACTTGTTTGATGGAGGTTTTGATATAATGAATAGTTC
TGGCAATAGTGCTTTTGTTAATTTTTAAGTTAGATCACCTTTTCAAGATA
TGTTAACACGGATACCTGAAGAGGTATTCTTTCAATGTATATGGTAGCTC
TCTTTTAAATGAATTACTCTATTATGTAGTTATTGAACAGGAGGATGTAT
TTAATTTCTTCATTTCAACACCTTATTAATTCTACAGTCCCAACCTTTTA
CTTTTTTCTTTTATTCATAATAGGTTTTTTTACTCATACAATATATTTTG
ATTATAGTTTCCCTTCCTCCACCTTCTCTGAGATCCACCAAAGTGGCCCT
CCTATCTGTACCCACACACTTTCTCTGTCTCATT

ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXAGTGAGATTGGAAGGGACTGCACTTTTACATGG
TCTTAGCAGCCAAGAACTATTTATCATTTCTGGTCATTTTCAAAATAGAA
TTTAACTTTTTTTCTGAGTGAATGAAAAGATTGATTCTTCTTCTCTCTTT
CTGAGGTAAGAAAAAGCTAGATATTTTTTATGAGAGAGCCAAATAATTCA
AATTAATTTTAATGAAGTGTCAGACACTATGGGTGACATAAAATACATGC
TCAGGAAAGAAAAATATAGTTATTCTTTGTGTCATCAATTTACTCATTTG
GATATGTAAACTACCATATCAAATAATCCATGGAGAAACATGCAAAAATC
CAGGAGCACTCTATTGTCTTAAAACAGCTAACAGATATCAGAAGGTCTTA
TTATTTTATCATCATCATTATTATTACTGTTATTATAAGAATGTACATTT
ATTTATAGTTTACTGCCATTCTCTGTAATGTTGCACATCCATTTTTATAA
AACCTTGATTCATAATTTGAAGAGTAATTTCATTCAATAAAAACACCTTC
CCTGTGCATATCTCTGTGCATACTGTTAGGCATAGGATTTACTTGACTTC
TCTTAGAATACGTTTTATAATTTGCACTCTCAAAGAGGAGATATTGAATT
TATACAAAGTACGCCTATTTA

Query= MSMg01no133_a24.g1 MSMg01no133_a24.g1 CHROMAT_FILE:
MSMg01no133_a24.g1 PHD_FILE: MSMg01no133_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:46 2005
         (654 letters)



>mm_chr16_52937396_52938448
          Length = 1053

 Score = 1108 bits (573), Expect = 0.0
 Identities = 635/659 (96%), Gaps = 12/659 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtgagattggaagggactgcacttttacatggtcttagcagccaagaactatttatcat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgagattggaagggactgcacttttacatggtcttagcagccaagaactatttatcat 260

                                                                       
Query: 61  ttctggtcattttcaaaatagaatttaactttttttctgagtgaatgaaaagattgattc 120
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctggtcatttttaaaatagaatttaactttttttctgagtgaatgaaaagattgattc 320

                                                                       
Query: 121 ttcttctctctttctgaggtaagaaaaagctagatattttttatgagagagccaaataat 180
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 ttcttctctctttctgaggtaagaaaaagctagatattttttatgagagaaccaaataat 380

                                                                       
Query: 181 tcaaattaattttaatgaagtgtcagacactatgggtgacataaaatacatgctcaggaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaaattaattttaatgaagtgtcagacactatgggtgacataaaatacatgctcaggaa 440

                                                                       
Query: 241 agaaaaatatagttattctttgtgtcatcaatttactcatttggatatgtaaactaccat 300
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaaaa-atagttattctttgtgtcatcaatttactcatttggatatgtaaactaccat 499

                                                                       
Query: 301 atcaaataatccatggagaaacatgcaaaaatccaggagcactctattgtcttaaaacag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atcaaataatccatggagaaacatgcaaaaatccaggagcactctattgtcttaaaacag 559

                                                                       
Query: 361 ctaacagatatcagaaggtcttattattttatcatcatcattat--t-attactgttatt 417
           ||||||||||||| |   ||||||||||||||||||||||| ||  | ||||   |||||
Sbjct: 560 ctaacagatatcaca---tcttattattttatcatcatcatcatcatcatta---ttatt 613

                                                                       
Query: 418 ataagaatgtacatttatttatagtttactgccattctctgtaatgttgcacatccattt 477
           |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 614 ataagaatgtacatttatttatagtttactgccattctttgtaatgctgcacatccattt 673

                                                                       
Query: 478 t-tataaaaccttgattcataatttgaagagtaatttcattcaataaaaa-caccttccc 535
           | ||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 674 tctataaaatcttgattcataatttgaagagtaatttcatccaataaaaaacaccttccc 733

                                                                       
Query: 536 tgtgcatatctctgtgcatactgttaggcataggatttacttgacttctcttagaatacg 595
           ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| 
Sbjct: 734 tgtgcatatctctgtgcatactgttaggcataggattgacttgacttctctcagaataca 793

                                                                      
Query: 596 ttttataatttgcactctcaaagaggagatattgaatttatacaaagtacgcctattta 654
           ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 794 ttttataatttgcactctcaaagaggagatactgaatttatacaaagtacgcctattta 852


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1053
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1043
Effective search space:   671692
Effective search space used:   671692
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)