Query= MSMg01no136_j19.b1 MSMg01no136_j19.b1 CHROMAT_FILE:
MSMg01no136_j19.b1 PHD_FILE: MSMg01no136_j19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:03 2005
(646 letters)
>mm_chr16_87907661_87908706
Length = 1046
Score = 1164 bits (602), Expect = 0.0
Identities = 635/646 (98%)
Strand = Plus / Minus
Query: 1 aagcatgtggtgtttatactacaaggtgtgtttgctaggaagcctgaacacggagaagca 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 846 aagcatgtggtgtttatactacaaggtctgtttgctaggaagcctgaacacggagaagca 787
Query: 61 aagggaaagaaaacaattttcctgtactgctttctgtacacctagttgctgcaaaaggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 aagggaaagaaaacaattttcctgtactgctttctgtacacctagttgctgcaaaaggca 727
Query: 121 ccataaattaatctcttgcagagagtaaagggcccctgcttcctgctgacattgtagctc 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 ccataaattaatctctcgcagagagtaaagggcccctgcttcctgctgacattgtagctc 667
Query: 181 acctgtaggaactacctcactaagcttcacccctctgtggattgttatgtccagatgcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 acctgtaggaactacctcactaagcttcacccctctgtggattgttatgtccagatgcgc 607
Query: 241 aggaattaaaatcgttttggctttcaaaattccttccacagaaactggcaatatgggcaa 300
||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 606 aggaattaaaatcgtttcggctttcaaaattccttccacagaaactggcgatatgggcaa 547
Query: 301 gaaggttctttcttaacctttcaaagcatttctaattacaagggttacaacgtgccggga 360
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 546 gaaggttctttcttaacttttcaaagcatttctaattacaagggttagaacgtgctggga 487
Query: 361 agagcaagccaaccctgcagttgcaccgccccatgctttcgcaccttgccaaacttgaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 agagcaagccaaccctgcagttgcaccgccccatgctttcgcaccttgccaaacttgaac 427
Query: 421 ttcactgatggaaggctgaaaccaactgatgcctaaactacctaacagcgggcctgggcc 480
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ttcactgacagaaggctgaaaccaactgatgcctaaactacctaacagcgggcctgggcc 367
Query: 481 tcacaatgtgtgtgcagaaaaactactaatggaaagcagagggattgagggaagttactg 540
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tcacaatgtgtgtgcagcaaaactactaatggaaagcagagggattgagggaagttactg 307
Query: 541 ttgtttcctcaacaatgaagacagttgaataaacttagccgaagttgcctttcttcccaa 600
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tagtttcctcaacaatgaagacagttgaataaacttagccgaagttgcctttcttcccaa 247
Query: 601 atttccaattgacattttcaaatttaactatcttaaatatgaaata 646
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atttccaattgacattttcaaatttaactatcttaaatatgaaata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_j19.g1 MSMg01no136_j19.g1 CHROMAT_FILE:
MSMg01no136_j19.g1 PHD_FILE: MSMg01no136_j19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:03 2005
(628 letters)
>mm_chr16_87796254_87797282
Length = 1029
Score = 1093 bits (565), Expect = 0.0
Identities = 613/629 (97%), Gaps = 1/629 (0%)
Strand = Plus / Plus
Query: 1 tgtagacattcaccataagatgaattatactcaaatctacacgtgcatgtgttataagaa 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 tgtagacattcaccataagatgaattatactcaaatctccacgtgcatgtgttataagaa 260
Query: 61 ccatcgaaagcaggcacatttgtgaggtaatacccatgagaagcgggaaggtagttcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccatcgaaagcaggcacatttgtgaggtaatacccatgagaagcgggaaggtagttcatt 320
Query: 121 tcgaaaacgggcaccttggtctcttcgccagttaggctcagcgtatcaatttcaagttat 180
||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 321 tcggaaacgggcaccttggtctcttcgccagttaggctcagcttttcaatttcaagttat 380
Query: 181 ctaattcttatcagtaaaaacgtacataagtaagcagaattgaacatttgtactcttagc 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgaattcttatcagtaaaaacgtacataagtaagcagaattgaacatttgtactcttagc 440
Query: 241 ggagatttcatataagcacctacacagagcaataaaaaaataaatctatccttactttga 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 ggagatttcatataagcacctacacagagcaataaaaaaataaatctatccttattttga 500
Query: 301 gacccagtcttctggctagaaacaccatctttgtgacagatttgtgagaggggaacaggg 360
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 gagccagtcttctggctagaaacaccatctttgtgacagatctgtgagaggggaacaggg 560
Query: 361 cagtcctgatcaaggggccccaaggaggacattcccagagagtatatgtggtgccagggg 420
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagtcctgatcaaggggccccgaggaggacattcccagagagtatatgtggtgccagggc 620
Query: 421 tggatatcagtgttctcagcgagcttgtgtctcttgggctaggaatag-tatcagggttt 479
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 621 cggatatcagtgttctcagcgagcttgtgtctcttgggctaggaataggtatcagggttt 680
Query: 480 aactgcagaagaaggaatggctggaaaggaagaccgggcagcgaggagctccacagagca 539
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 681 aactgcagaagaaggaatggctggaaaggaacacggggcagcgaggagctccacagagca 740
Query: 540 ggctgcaactctggcccacacacggctttttgcttccataaaaggaattaattgattgat 599
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 741 ggctgcaactctggcccacacacgactttctgcttccataaaaggaattaattgattgat 800
Query: 600 tttttgattttcaagacagggcacggaat 628
|||||||||||||||||||||||||||||
Sbjct: 801 tttttgattttcaagacagggcacggaat 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1029
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1019
Effective search space: 629742
Effective search space used: 629742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
