Query= MSMg01no141_b15.b1 MSMg01no141_b15.b1 CHROMAT_FILE:
MSMg01no141_b15.b1 PHD_FILE: MSMg01no141_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:08 2005
(703 letters)
>mm_chr16_29506413_29507515
Length = 1103
Score = 1265 bits (654), Expect = 0.0
Identities = 691/706 (97%), Gaps = 7/706 (0%)
Strand = Plus / Minus
Query: 4 aagaataaa-caccccattttcactcatacctgaaaactaaaaatcttggcctggatgtt 62
||||||||| | ||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 1034 aagaataaatc-ccccattttcactcatatatgaaaactaaaagtcttggcctggatgtt 976
Query: 63 tggaatgttacttgatttgtggaagcacatggcggtaggggacagagaagagttggtcaa 122
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 975 tggaatgttacttgatttgtggaagcacatggcggtaggggacacagaagagttggtcaa 916
Query: 123 tgcacaggagataaaaaggagtgagtggtgtgtttcacagtacaccacagtcattctagt 182
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 tgcacaggagataaaagggagtgagtggtgtgtttcacagtacaccacagtcattctagt 856
Query: 183 aacaacagaacagagaattctgaacgcttgcaccagagagaagtgagtgtttgagactat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 aacaacagaacagagaattctgaacgcttgcaccagagagaagtgagtgtttgagactat 796
Query: 243 ggatatgccaattggcttgcttggatcattgcacattgtctacacaaatcaaaagttcac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ggatatgccaattggcttgcttggatcattgcacattgtctacacaaatcaaaagttcac 736
Query: 303 actgcctcattagtataaacagtcactaagaatcaactgacaaaacaccacaagtcctac 362
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 735 actgcctcattagtataaacagtcaccaagagtcaactgacaaaacaccacaagtcctac 676
Query: 363 acaagacatgcattggtcagacttttacccccgagacttgaaacgcctgagcaaaacaac 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 acaagacatgcattggtcagacttttacccccgagacttgaaacgcctgagcaaaacaac 616
Query: 423 ttgcactgggtggttttgacttggctcatcacggtgaccagagagtgtcctcactgtttg 482
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ttgcgctgggtggttttgacttggctcatcacggtgaccagagagtgtcctcactgtttg 556
Query: 483 actttttctgtttcccctctttatttcatgcccatgggatgctgttgcccatatctaggc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 actttttctgtttcccctctttatttcatgcccatgggatgctgttgcccatatctaggc 496
Query: 543 tgtctgctcctcttggttaatccctcatagaaacacccagagtagc-----acttagtgt 597
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 495 tgtctgctcctcttggttaatccctcatagaaacacccagagtagcacttaacttagtgt 436
Query: 598 tctaggtactgcccaatccaatcaggttgacggtcagcattaggcatcacagtagccgaa 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tctaggtactgcccaatccaatcaggttgacggtcagcattaggcatcacagtagccgaa 376
Query: 658 ggcatctgagtaaatactgttaacacatttctctcccgttctcctc 703
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ggcatctgagtaaatactgttaacacatttctctcccgttctcctc 330
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 703
Length of database: 1103
Length adjustment: 10
Effective length of query: 693
Effective length of database: 1093
Effective search space: 757449
Effective search space used: 757449
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no141_b15.g1 MSMg01no141_b15.g1 CHROMAT_FILE:
MSMg01no141_b15.g1 PHD_FILE: MSMg01no141_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:08 2005
(323 letters)
>mm_chr16_29374440_29375161
Length = 722
Score = 553 bits (286), Expect = e-162
Identities = 313/322 (97%), Gaps = 1/322 (0%)
Strand = Plus / Plus
Query: 2 aattttagaacatgacagaattgaatggcatgtcctccagggttaaaaaaatattgttga 61
|||||||||||||||||||| |||||||||||||| ||||||||||||||| | ||||||
Sbjct: 202 aattttagaacatgacagaactgaatggcatgtcccccagggttaaaaaaa-aatgttga 260
Query: 62 agaactcactttctaaccagtaggaaaatataaaggattctgagggatgtgtgtctcagt 121
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaactcactttctaaccagtagaaaaatataaaggattctgagggatgtgtgtctcagt 320
Query: 122 gctgtgtcttttctgttaattgggctaagacgatagatgaaacctctttccaatttgtct 181
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctgggccttttctgttaattgggctaagacgatagatgaaacctctttccaatttgtct 380
Query: 182 tgcccatgtgcaacatcaacccaagattaactgcggtttcaactcagtcctgttttgaga 241
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 tgcccatgtgcaacatcaacccaagattaactgcggtttcaactcagtcgtgttttgaga 440
Query: 242 tgactgggcccgccagtttgctgtatgctactctcgctgacaacagtccaaggatgaagt 301
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgactgggcccgccagtttgctgtatgctactctcgctgacaacagtccaaggatgaagt 500
Query: 302 ggtgggagtggatgtaggagtt 323
||||||||||||||||||||||
Sbjct: 501 ggtgggagtggatgtaggagtt 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 722
Length adjustment: 9
Effective length of query: 314
Effective length of database: 713
Effective search space: 223882
Effective search space used: 223882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
