Query= MSMg01no144_d16.b1 MSMg01no144_d16.b1 CHROMAT_FILE:
MSMg01no144_d16.b1 PHD_FILE: MSMg01no144_d16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:00 2005
(590 letters)
>mm_chr16_76551550_76552540
Length = 991
Score = 1002 bits (518), Expect = 0.0
Identities = 575/598 (96%), Gaps = 8/598 (1%)
Strand = Plus / Minus
Query: 1 ctgcccacatgaacaaaaaagcaaaaagtactcaagaaactacaatgaatgaaaaaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 ctgcccacatgaacaaaaaagcaaaaagtactcaagaaactacaatgaatgaaaaaacaa 721
Query: 61 aacaaaagatgaactacatgagagtttttagatgtttaactggtatatttttttaaatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 720 aacaaaagatgaactacatgagagtttttagatgtttaactggtatattttttaaaatgt 661
Query: 121 gctaaactccttgggccttatcaagaaactgtttgtttaaatggagcccaagacccagaa 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 660 gctaaactccttgggccttatcaagaaactctttgtttaaatggagcccaagacccagaa 601
Query: 181 attgttaaaagttatatatctatatctatttgtagcagaaaacccaaagcttaaacaaac 240
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 600 attgaaaaaagttatatatctatatctatttgtagcagaaaactcaaagcttaaacaaac 541
Query: 241 atattgcttttgta-atttagtttcacaattgggtacaagttgaaaaggccatgtgtagt 299
|||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 atattgcttttgaagaactagtttcacaattgggtacaagttgaaaaggccatgtgtagt 481
Query: 300 caccaagaaaatcagacatgctttcagtgtaaaggcaaataaacacgtagtgcatgtaat 359
||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||
Sbjct: 480 caccaagaaaatcagacataatttcagtgtaaaggcaaataaataggtagtgcatgtaat 421
Query: 360 ggcatgatcacacacatgatggctgtccactcacctttggctatgaaaatcatactgtgg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ggcatgatcacacacatgatggctgtccactcacctttggctatgaaaatcatactgtgg 361
Query: 420 atcctttataagtatctgtctctcccgtcatcttggttggacccagaacctcacacgtga 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 360 atcctttataagtatctgtctctcccgtcatcttggttggacccagaacctcacacatga 301
Query: 480 taaactatagatatagtttaaaacaaaactaatgaatggaagctagtggggccatggctc 539
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 300 taaactatagatatagtttaaaacaaaaccaatgaatggaagctagtggggccatggctc 241
Query: 540 taagaaataatagacacatttaaagctgtaatttaaaaaa-------gccctccatgg 590
||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 240 taagaaataatagacacatttaaagctgtaattaaaaaaaaaaaaaagccctccatgg 183
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 991
Length adjustment: 10
Effective length of query: 580
Effective length of database: 981
Effective search space: 568980
Effective search space used: 568980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no144_d16.g1 MSMg01no144_d16.g1 CHROMAT_FILE:
MSMg01no144_d16.g1 PHD_FILE: MSMg01no144_d16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:00 2005
(185 letters)
>mm_chr16_76423913_76424497
Length = 585
Score = 339 bits (175), Expect = 9e-98
Identities = 181/183 (98%)
Strand = Plus / Plus
Query: 1 caaatgtagaacgattaattttatggcctaatatctgattaaattgcactgtgcttctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaatgtagaacgattaattttatggcctaatatctgattaaattgcactgtgcttctaa 260
Query: 61 gagtgcacagactccacacattagacgggccgtttaatcccatcattttaagtggaagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 gagtgcacagactccacacattagacgggccgtttaatcccatcattttaagtggaactg 320
Query: 121 aaccccatcttgccaaatatgataataccctgggggcaggggtgggagggggtgcgggag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 aaccccatcttgccaaatatgataataccctgggggcaggggtgggagggggtgcggggg 380
Query: 181 tgg 183
|||
Sbjct: 381 tgg 383
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 185
Length of database: 585
Length adjustment: 8
Effective length of query: 177
Effective length of database: 577
Effective search space: 102129
Effective search space used: 102129
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
