Query= MSMg01no146_l13.b1 MSMg01no146_l13.b1 CHROMAT_FILE:
MSMg01no146_l13.b1 PHD_FILE: MSMg01no146_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:08:50 2005
(606 letters)
>mm_chr16_73955919_73956924
Length = 1006
Score = 1120 bits (579), Expect = 0.0
Identities = 599/611 (98%), Gaps = 10/611 (1%)
Strand = Plus / Minus
Query: 1 cagtccacggaggctgaacttagcctctttccttgggcattacggcagattgtggttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 cagtccacggaggctgaacttagcctctttccttgggcattacggcagattgtggttttg 747
Query: 61 agtattcatcttgatcatggtcaagtatttgtgagaattgtttgtcagctatagtacacc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 746 agtattcatcttgatcatggtcaaatatttgtgagaattgtttgtcagctatagtacacc 687
Query: 121 atacaggcctgtaggttaattggcatgagttcataatatgattcatacagttgtttgcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 atacaggcctgtaggttaattggcatgagttcataatatgattcatacagttgtttgcat 627
Query: 181 atgtgtcctataatcttacagctaccaccatagaattttatttttaaaggttgactaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 atgtgtcctataatcttacagctaccaccatagaattttatttttaaaggttgactaaca 567
Query: 241 acttacttattttcaattgatttttt-----agtaattgtggttcaatgaaaagacagaa 295
|||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 566 acttacttattttcaattga-----tccacaagtaattgtggttcaatgaaaagacagaa 512
Query: 296 caacaagggaaacattagagagtatattttgactcaaagctgtatgcttcctctgggcca 355
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 caacaagggaatcattagagagtatattttgactcaaagctgtatgcttcctctgggcca 452
Query: 356 gtgtatgtcaaaatgagaaggtcccaaaaaggactttgtaattcaaatatacatatgaga 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gtgtatgtcaaaatgagaaggtcccaaaaaggactttgtaattcaaatatacatatgaga 392
Query: 416 agaaaacttcacgctccatctattcaaattcttgaatgaaagtgttcccccttcactctt 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 agaaaacttcacgctccatctattcaaattcttgaatgaaagtgttcccccttcactctt 332
Query: 476 ggcaatgtttatttgttcttgataagaatatgagtgaatttatctagaccgtggcaatgt 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ggcaatgtttatttgttcttgataagaatatgagtgaatttatctagaccgtggcaatgt 272
Query: 536 gtgcctgccctttgacgcaaacaatgctttgggggagtctttcatgtatttttcaaacag 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gtgcctgccctttgacgcaaacaatgctttgggggagtctttcatgtatttttcaaacag 212
Query: 596 tttcaatgcat 606
|||||||||||
Sbjct: 211 tttcaatgcat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no146_l13.g1 MSMg01no146_l13.g1 CHROMAT_FILE:
MSMg01no146_l13.g1 PHD_FILE: MSMg01no146_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:08:50 2005
(594 letters)
>mm_chr16_73819839_73820832
Length = 994
Score = 350 bits (181), Expect = e-100
Identities = 181/181 (100%)
Strand = Plus / Plus
Query: 414 gaagcacagacatttgtaaaatattaaaaacaactttgatgatgattttcatttttccca 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gaagcacagacatttgtaaaatattaaaaacaactttgatgatgattttcatttttccca 673
Query: 474 gccatgagctgattggctattacctcctctatgttactgaaagtaatataggaaattgta 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gccatgagctgattggctattacctcctctatgttactgaaagtaatataggaaattgta 733
Query: 534 ctgaactggtttagcttagactctagttttggacttttgttgtaataatgagtcttattc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ctgaactggtttagcttagactctagttttggacttttgttgtaataatgagtcttattc 793
Query: 594 a 594
|
Sbjct: 794 a 794
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space: 574656
Effective search space used: 574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
