Query= MSMg01no148_l20.b1 MSMg01no148_l20.b1 CHROMAT_FILE:
MSMg01no148_l20.b1 PHD_FILE: MSMg01no148_l20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:44 2005
(643 letters)
>mm_chr16_50061604_50062646
Length = 1043
Score = 1087 bits (562), Expect = 0.0
Identities = 624/648 (96%), Gaps = 9/648 (1%)
Strand = Plus / Plus
Query: 1 atgaaataactctttctctctaatccccttggcttaatctttccctgatctgggattaaa 60
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 201 atgaaataactctttctctctaatccccttggcttaatctctcccttatctgggattaaa 260
Query: 61 atttacaattcccacatatgcttagttgctaaacaggctcacagctcaggaatgcatatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttacaattcccacatatgcttagttgctaaacaggctcacagctcaggaatgcatatg 320
Query: 121 caaaagtctaaactgttgatcacgtgctattaggaaattctggggcattccaactgttct 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaaagtctaaactgttgatcacatgctattaggaaattctggggcattccaactgttct 380
Query: 181 ccctaaccaagatccttagacgctacagcaaaagtgtttccagtacttccttcctcctta 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 ccctaaccaagatccttagacgctacagaaaaagtgtttccagtacttccttcctcctta 440
Query: 241 gaacggggaacaaaatacccatggagaaagttacagggacagaatttggagctgagacga 300
||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 441 gaatggggaacaaaatacccatggagggagttacagggacagaatttggagctgagacaa 500
Query: 301 aaggatggaccatccagagacagccccacccaggaatccatcc--ta--cccccagccac 356
|| || ||||||||||||||||||||||||||||||||||||| || | ||||||
Sbjct: 501 aaagaaggaccatccagagacagccccacccaggaatccatcccataaac----agccac 556
Query: 357 caaacccagacactattgcatatgccagcaagattttgc-gacaagaccctgacatagat 415
||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |
Sbjct: 557 caaacccagacactattgcatatgccagcaagactttgctgacaagaccctgacatagct 616
Query: 416 gtctcttgtgaggctatgccagtgcctggtaaatacagaagtggatgctcacagtcatct 475
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 617 gtctcttgtgaggctatgccagtgcctggcaaatacagaagtggatgctcacagtcatct 676
Query: 476 attggatggaacatgggacccccaatagaggagctagagaaagtaaccaaggagttaaag 535
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 677 attggatggaacatgggacccccaatggaggagctagagaaagtaaccaaggagttaaag 736
Query: 536 gggtctgcacccctataggaggatcagcagtatgaactaaccagtacctccagagctgag 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gggtctgcacccctataggaggatcagcagtatgaactaaccagtacctccagagctgag 796
Query: 596 tctctagttgcataggtagcacaggatggcctagtcggccatctttag 643
||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 797 tctctagttgcataggtagcaaaggatggcctagtcggccatctttag 844
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_l20.g1 MSMg01no148_l20.g1 CHROMAT_FILE:
MSMg01no148_l20.g1 PHD_FILE: MSMg01no148_l20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:44 2005
(344 letters)
>mm_chr16_50202824_50203567
Length = 744
Score = 650 bits (336), Expect = 0.0
Identities = 339/340 (99%)
Strand = Plus / Minus
Query: 5 ccatttgcatgctgaccctaccaatgtttatcttatccttatctgataagtctgtatgca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ccatttgcatgctgaccctaccaatgtttatcttatccttatctgataagtctgtatgca 485
Query: 65 tgagaaaagtttaagcctcacagtttttctactttgtccagcctggtgcttcaaggtaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tgagaaaagtttaagcctcacagtttttctactttgtccagcctggtgcttcaaggtaaa 425
Query: 125 tgtcccagctgttaatgtgaatataagaagtacatatttaatctctgtgtcttcaaacaa 184
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 424 tgtcccagctgttaatgtgaatataagaagtacatatttaatctctatgtcttcaaacaa 365
Query: 185 gaaagtactgttatcatcctacccaactgtactggcccagaaggtctcagaaaggtgccc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gaaagtactgttatcatcctacccaactgtactggcccagaaggtctcagaaaggtgccc 305
Query: 245 tggccacacccagaacttgtgatctcttaggatacaggcagtaggcttgcatacattaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tggccacacccagaacttgtgatctcttaggatacaggcagtaggcttgcatacattaat 245
Query: 305 acctccacctaccagatcaaacactgtaccaaatccaaag 344
||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 acctccacctaccagatcaaacactgtaccaaatccaaag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
