ATCATAATTTGCGGCGCTAAACGACTCCTATAGGTCGAGAATCCGCGGAA
TTCAAAGTCATAGAACCTCAGTTTTAAGAAGATCCAATTCAGGCAGGGCA
TTTCTTTTTCTGAGTTCAGAGCATATGAATTAAAGTATTCCACCATCTTA
ATAAAACTGAGAAGAACTTTGTTCCTGATTTGTATATCCTTTCTTATTCA
CCTCAGAGTCATTGGCTCCTTGTGCAACTGGCCAACTAAGGCACAGTTCT
TAACTGAAGTAACAACTCACACCCTAACATCATTAAACTATATGTTTAGT
TTGGGGGTACAGATGGATTTCTGGAGAATTCTGTCATGGTTGTTTGTTTG
TTTGTTTGTTTGTTTGACTGGGGGTCCTAAAAGAAAGAAAAGAAAATTTG
AGTAAGATTCATATAAACAACACACAAATAAACAATAGAGTTAAAGATGC
TTCCTACCATAAAAAACTATTCACAACTGAACATGAAATTCTCTTTTACA
GAGTGAAGAACACATGCTCTTTTTTCCTAAGGGTTTTTTTCCTTCTTTTC
TTTCTTCCTTTCTTCCTTCCTTCCTTTCTTTTATATTCATTGGGCAGCTA
AATAGCAGAGAGTAAGCTCAGTTTTGACCCCAGGTATATGAATTAAAGTA
TTCCACCATCTTGATAAAACTGAGAAGAACTTGGTTCCTGATTTGTACGT
TCTTTCTTATTCACCTCAGAGTCAGTGACTCTN

TGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXTTCGAATTCACAGGCTCAAAGAAACTAAGTAACAAGAAGG
CCCCAGAAAGGATGTGTGAATCTCATTTAGAAGGGGAAACAAAATAGTTA
TCAGAGGTAGACTGAGAGAGGGAACTGTGTGGGAGAGGGGGTGAGAAGTG
GAATGGTGATGNNNNTCTNNNNNCTNNNNNNNNNNNNCNNCNCTNTTTCT
TTCTCTNTCTTTCTTTCTCTTCCCCCTTTTCCTTCCTTTCTTCCCCCTTT
TTTCCCCTTTCTCCCCCCCTCCCCCCTCTCTTTTTTTCTTCCCCCTCTCC
TTTTTCTTCCCCCCCCTTCTCTTCTCTCCCCCCCCCCCCCCTCTCTTCTC
TTTCTCTCTTCTTCTCTCTNTTTTTTTTTGTTTCCCCCCCCCCGCGTGNT
CTCCCCCTCCTTTTCCCTTCTCTCCCTCTCTCTCCCCCTTTTCTTTTCCC
CCCTCTTCCCCCTTTCCTTTCTCTTCCCCCCCCCCTTCTTTCTCCTTCCT
CCTTCCTTCCCTCTTCTTCCCCCTCTCCTCTCCCCTCCGTCTCTTCTCCT
CTCCCTCCCTCCCTCCCCTTATCTCCCCCTCCCTCTCCCTTTTCCTCCCT
CCCTCTTCCCTCCTTTCTTCCTCTCCTTTTTCCTCTCCCTCCCTCCCTTT
TCTCCTTATCTCCCTCTTTCTCTTCTCCCTTCTTTTCCCCCCTCTCCCTT
TCTCTCCTCCTTTTTTCCCCCCCCCCTCGCTTTCCCTCTTTCTCCTCTTC
CCTTCTCCC

Query= MSMg01no148_p19.b1 MSMg01no148_p19.b1 CHROMAT_FILE:
MSMg01no148_p19.b1 PHD_FILE: MSMg01no148_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:04 2005
         (668 letters)



>mm_chr16_59856297_59857364
          Length = 1068

 Score = 1224 bits (633), Expect = 0.0
 Identities = 657/665 (98%), Gaps = 1/665 (0%)
 Strand = Plus / Minus

                                                                        
Query: 4    gaattcaaagtcatagaacctcagttttaagaagatccaattcaggcagggcatttcttt 63
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 gaattcaaagtcatagaacttcagttttaagaagatccaattcaggcagggcatttcttt 954

                                                                        
Query: 64   ttctgagttcagagcatatgaattaaagtattccaccatcttaataaaactgagaagaac 123
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953  ttctgagttcagagcatatgaattaaagtattccaccatcttaataaaactgagaagaac 894

                                                                        
Query: 124  tttgttcctgatttgtatatcctttcttattcacctcagagtcattggctccttgtgcaa 183
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893  tttgttcctgatttgtatatcctttcttattcacctcagagtcattggctccttgtgcaa 834

                                                                        
Query: 184  ctggccaactaaggcacagttcttaactgaagtaacaactcacaccctaacatcattaaa 243
            |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 833  ctggccaactaaggcacagttcttaattgaagtagcaactcacaccctaacatcattaaa 774

                                                                        
Query: 244  ctatatgtttagtttgggggtacagatggatttctggagaattctgtcatggttgtttgt 303
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773  ctatatgtttagtttgggggtacagatggatttctggagaattctgtcatggttgtttgt 714

                                                                        
Query: 304  ttgtttgtttgtttgtttgactgggggtcctaaaagaaagaaaagaaaatttgagtaaga 363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713  ttgtttgtttgtttgtttgactgggggtcctaaaagaaagaaaagaaaatttgagtaaga 654

                                                                        
Query: 364  ttcatataaacaacacacaaataaacaatagagttaaagatgcttcctaccataaaaaac 423
            ||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653  ttcatataaacaaaatagaaataaacaatagagttaaagatgcttcctaccataaaaaac 594

                                                                        
Query: 424  tattcacaactgaacatgaaattctcttttacagagtgaagaacacatgctcttttttcc 483
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593  tattcacaactgaacatgaaattctcttttacagagtgaagaacacatgctcttttttcc 534

                                                                        
Query: 484  taagggtttttttccttcttttctttcttcctttcttccttccttcctttcttttatatt 543
            |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533  taaggg-ttttttccttattttctttcttcctttcttccttccttcctttcttttatatt 475

                                                                        
Query: 544  cattgggcagctaaatagcagagagtaagctcagttttgaccccaggtatatgaattaaa 603
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474  cattgggcagctaaatagcagagagtaagctcagttttgaccccaggtatatgaattaaa 415

                                                                        
Query: 604  gtattccaccatcttgataaaactgagaagaacttggttcctgatttgtacgttctttct 663
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414  gtattccaccatcttgataaaactgagaagaacttggttcctgatttgtacgttctttct 355

                 
Query: 664  tattc 668
            |||||
Sbjct: 354  tattc 350


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space:   696164
Effective search space used:   696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)