Query= MSMg01no149_f08.b1 MSMg01no149_f08.b1 CHROMAT_FILE:
MSMg01no149_f08.b1 PHD_FILE: MSMg01no149_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:34 2005
(402 letters)
>mm_chr16_25600759_25601560
Length = 802
Score = 652 bits (337), Expect = 0.0
Identities = 349/355 (98%), Gaps = 4/355 (1%)
Strand = Plus / Minus
Query: 1 ctaaaactataattctgaactgtaaaatatttaaatatggtaaaatgaatttttctccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ctaaaactataattctgaactgtaaaatatttaaatatggtaaaatgaatttttctccta 296
Query: 61 aacaagtactgggaatgtttccataagttcagaccatcattaaataaattagcaggaagt 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aacaggtactgggaatgtttccataagttcagaccatcattaaataaattagcaggaagt 236
Query: 121 gctgatgaaacacttatgatattctatcacatctatctatctatctatctatctatctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 gctgatgaaacacttatgatattctatcacatctatctatctatctatctatctatctat 176
Query: 181 ctatctatcta----tctatctacctatctatctacctatcatctatatatctgtcatct 236
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 ctatctatctacctatctatctacctatctatctacctatcatctatatatctgtcatct 116
Query: 237 atttattatctatatgtctatctcctatctaattatcaatcatttatgtaacaatcgttt 296
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 atttattatcgatatgtctatctcctatctaattatcaatcatttatgtaacaatcgttt 56
Query: 297 atcatttatctagcattcaactatctatatctatctatctatctatctatctatc 351
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 atcatttatctagcattcaactatctatatctatctatctatctatctatctatc 1
Score = 70.3 bits (36), Expect = 2e-16
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 324 tatctatctatctatctatctatctatctatctatc 359
||||||||||||||||||||||||||||||||||||
Sbjct: 202 tatctatctatctatctatctatctatctatctatc 167
Score = 68.4 bits (35), Expect = 8e-16
Identities = 42/45 (93%), Gaps = 2/45 (4%)
Strand = Plus / Minus
Query: 317 ctatcta--tatctatctatctatctatctatctatctatctatc 359
||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 203 ctatctatctatctatctatctatctatctatctatctacctatc 159
Score = 68.4 bits (35), Expect = 8e-16
Identities = 39/41 (95%), Gaps = 2/41 (4%)
Strand = Plus / Minus
Query: 319 atcta--tatctatctatctatctatctatctatctatcta 357
||||| ||||||||||||||||||||||||||||||||||
Sbjct: 205 atctatctatctatctatctatctatctatctatctatcta 165
Score = 68.4 bits (35), Expect = 8e-16
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 325 atctatctatctatctatctatctatctatctatc 359
|||||||||||||||||||||||||||||||||||
Sbjct: 205 atctatctatctatctatctatctatctatctatc 171
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 76
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 7
Length of query: 402
Length of database: 802
Length adjustment: 9
Effective length of query: 393
Effective length of database: 793
Effective search space: 311649
Effective search space used: 311649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_f08.g1 MSMg01no149_f08.g1 CHROMAT_FILE:
MSMg01no149_f08.g1 PHD_FILE: MSMg01no149_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:34 2005
(340 letters)
>mm_chr16_25472822_25473561
Length = 740
Score = 619 bits (320), Expect = 0.0
Identities = 335/340 (98%)
Strand = Plus / Plus
Query: 1 ataggtggccgatgggccagtggaatggtggctgccttccactcagagagaaatgttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataggtggccgatgggccagtggaatggtggctgccttccactcagagagaaatgttctc 260
Query: 61 ttcagggtgagcagtccacggagctgggtatacatccaattctcaaggaggtctcttctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcagggtgagcagtccacggagctgggtatacatccaattctcaaggaggtctcttctc 320
Query: 121 cctcaagggagctacctcttagcttccttatgagttggtttccctccgagggattgatat 180
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 cctcaagggagctacctcttagcttccttatgagttgctttccctccgagggattgatac 380
Query: 181 gaccaagaacgctgaggtactcgtgtattctcagaagggaaaggtcctctaaaaatatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaccaagaacgctgaggtactcgtgtattctcagaagggaaaggtcctctaaaaatatgg 440
Query: 241 attgccttgacctggcctcaacaggctggcactttatcctcttctccctaccccacccct 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 attgccttgacctggcctcaacaggctggtactttatcctcttctccctaccccacccct 500
Query: 301 gaatcgatcttcagtaagagtggtatccaagtataaagta 340
||||| |||||||||||||||||||||||| |||||||||
Sbjct: 501 gaatctatcttcagtaagagtggtatccaaatataaagta 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
