Query= MSMg01no150_h14.b1 MSMg01no150_h14.b1 CHROMAT_FILE:
MSMg01no150_h14.b1 PHD_FILE: MSMg01no150_h14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:02 2005
(367 letters)
>mm_chr16_30459656_30460422
Length = 767
Score = 663 bits (343), Expect = 0.0
Identities = 359/365 (98%), Gaps = 3/365 (0%)
Strand = Plus / Minus
Query: 6 ggaattgatacgt-tactaaaaaactgggtgtttggtctgcgtgagaagagctagcaaaa 64
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ggaattgatacgtaaaataaaaaactgggtgtttggtctgcgtgagaagagctagcaaaa 439
Query: 65 agcaattagcaattcttcttaactggagatctctggagagccaaacagttcttcaagaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 agcaattagcaattcttcttaactggagatctctggagagccaaacagttcttcaagaat 379
Query: 125 tttttcttaacaggattctctgacttggtcggaagatccagtaatttttatagaagcttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tttttcttaacaggattctctgacttggtcggaagatccagtaatttttatagaagcttt 319
Query: 185 tctgactctggtagcaagaaaaaaaaatatctagagcagagcagaacatacacacacaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tctgactctggtagcaagaaaaaaaaatatctagagcagagcagaacatacacacacaga 259
Query: 245 cacacacactctcacacatacatactctcacacttacacacacacacacac--tctcaca 302
||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 258 cacacacactctcacacatacatactctcacacatacacacacacacacacactctcaca 199
Query: 303 catacatactctcacacatacacacacacactctcacacatacatactctcacacataca 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 catacatactctcacacatacacacacacactctcacacatacatactctcacacataca 139
Query: 363 cacac 367
|||||
Sbjct: 138 cacac 134
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 61
Number of extensions: 15
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space: 271364
Effective search space used: 271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no150_h14.g1 MSMg01no150_h14.g1 CHROMAT_FILE:
MSMg01no150_h14.g1 PHD_FILE: MSMg01no150_h14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:02 2005
(292 letters)
>mm_chr16_30408531_30409222
Length = 692
Score = 420 bits (217), Expect = e-122
Identities = 236/247 (95%), Gaps = 9/247 (3%)
Strand = Plus / Plus
Query: 1 cttgcttaggttggagccctcgtgagctcaccacccctacaaagtcccatctccaaacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 cttgcttaggttggagccctcgtgagctcaccacccctacaaagtcccatctccaaacat 269
Query: 61 tgctctggaaaccaaacattcaaggcaggagcaagccttgaattctggctcccatccaaa 120
|||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 270 tgctctggaaaccaaacattcaaggcaggagc----ctt-----ctggctcccatccaaa 320
Query: 121 ccacgcaagacccggaataggcacagctgatcctgtttgtccccaggcttgttattggtc 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 ccacgcaagacccggaataggcacaactgatcctgtttgtccccaggcttgttattggtc 380
Query: 181 cccattcactcctaggtgctctgtgccagggttctgtggcatgaagcagagtgggcacct 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 cccattcactcctaggtgctctgtgcccgggttctgtggcatgaagcagagtgggcacct 440
Query: 241 gccaatg 247
|||||||
Sbjct: 441 gccaatg 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
