Query= MSMg01no152_i21.b1 MSMg01no152_i21.b1 CHROMAT_FILE:
MSMg01no152_i21.b1 PHD_FILE: MSMg01no152_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:40 2005
(169 letters)
>mm_chr16_84597860_84598428
Length = 569
Score = 250 bits (129), Expect = 5e-71
Identities = 156/165 (94%)
Strand = Plus / Plus
Query: 5 gaattcttaaaaagtttccacttaaagtattttaaaaggtttccaagaagatccgagtgt 64
|||||||||||||||| | ||||||||||||| |||||||||||||||||||| | ||||
Sbjct: 205 gaattcttaaaaagttacaacttaaagtatttaaaaaggtttccaagaagatctgggtgt 264
Query: 65 tcctatccttgcggatattgtgtggatttgtgcttgtttcttgaccagggttctctgaca 124
||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 265 tcctatccttggggatattctgtggatttgtgcttgtttcttggccagggttctctgaca 324
Query: 125 aacgagaccaagagcaaaaattatataaatcttgcgaaacaaata 169
||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 325 aacgagaccaaaagcaaaaattatataaatcttgcgaaacaaata 369
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 569
Length adjustment: 8
Effective length of query: 161
Effective length of database: 561
Effective search space: 90321
Effective search space used: 90321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no152_i21.g1 MSMg01no152_i21.g1 CHROMAT_FILE:
MSMg01no152_i21.g1 PHD_FILE: MSMg01no152_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:40 2005
(284 letters)
>mm_chr16_84715073_84715753
Length = 681
Score = 511 bits (264), Expect = e-149
Identities = 278/284 (97%), Gaps = 3/284 (1%)
Strand = Plus / Minus
Query: 1 cattaaacttctgtatatcaaattattacctatgtcaggcaacataggggtgagttttgg 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 481 cattaaacttctgtatatcaaattattacctatgtcaggcaac---ggggtgagttttgg 425
Query: 61 attggctttaagacatcactgtgggattttattaccttacaaagagttgttcatctccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 attggctttaagacatcactgtgggattttattaccttacaaagagttgttcatctccag 365
Query: 121 tgagctgcacaccaaccttgtaaagtttcatccgcattcatgaagaaatgcgtaggaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tgagctgcacaccaaccttgtaaagtttcatccgcattcatgaagaaatgcgtaggaaac 305
Query: 181 atgggtctccttactacacagctttgctgtgcagctaaagcagtgagcttgaacccagat 240
|||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 304 gtgggtctccttactacacagctttactgtgcagctaaagcagtaagcttgaacccagat 245
Query: 241 ttgggtttcatttcaaatgtgaatatttgaaattaaatattaat 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ttgggtttcatttcaaatgtgaatatttgaaattaaatattaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 681
Length adjustment: 9
Effective length of query: 275
Effective length of database: 672
Effective search space: 184800
Effective search space used: 184800
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
