Query= MSMg01no153_a03.b1 MSMg01no153_a03.b1 CHROMAT_FILE:
MSMg01no153_a03.b1 PHD_FILE: MSMg01no153_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:17 2005
(555 letters)
>mm_chr16_49374554_49375508
Length = 955
Score = 1011 bits (523), Expect = 0.0
Identities = 543/553 (98%), Gaps = 8/553 (1%)
Strand = Plus / Plus
Query: 7 attcagctatgg----taccccccagttcccctagggcctgggaccttgaatttagtttc 62
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 attcagctatgggaagt---ccccagttcccctagggcctgggaccttgaatttagtttc 262
Query: 63 tctctatgattaaatggagtctgaaaattaaatggtagtacttagaataagtttcttttg 122
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 263 tctctatgattaaatggagtctgaaaattaaatggtagtacttagaatacgtttcttttg 322
Query: 123 cttgttgccaacaatgatacaatacttttcttctctacaatgcacagccagtcacagatt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cttgttgccaacaatgatacaatacttttcttctctacaatgcacagccagtcacagatt 382
Query: 183 ggcaggctttgagtagaaccatttaattgatgtttttggtccacacagattaaaaaaaaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ggcaggctttgagtagaaccatttaattgatgtttttggtccacacagattaaaaaaaaa 442
Query: 243 aaaaaaaaaacaatcactaaaggtgtaacatgtaccaacaggttttctgttttcttgtaa 302
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 443 aaaaaaaaa-caatcactaaaggtgtaacatgtaccaactggttttctgttttcttgtaa 501
Query: 303 aatatcattgaaaagtaaagaatcaggctagaataggttcctatactcttgtgggaactt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aatatcattgaaaagtaaagaatcaggctagaataggttcctatactcttgtgggaactt 561
Query: 363 agcaacagtctgtgccaactgtcttttcaatcctctccctgcctgttctcttccttctgt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 agcaacagtctgtgccaactgtcttttcaatcctctccctgcctgttctcttccttctgt 621
Query: 423 attttcctgcccctctttcaggccgatttggggctcctgattgacacgttaggtaatgga 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 attttcctgcccctctttcaggccgatttggggctcctgattgacacgttaggtaatgga 681
Query: 483 gaagagtcttaacatttccaggatttttcggtcactaatgccataattcaagagcatgcc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gaagagtcttaacatttccaggatttttcggtcactaatgccataattcaagagcatgcc 741
Query: 543 tgatatttctggg 555
|||||||||||||
Sbjct: 742 tgatatttctggg 754
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_a03.g1 MSMg01no153_a03.g1 CHROMAT_FILE:
MSMg01no153_a03.g1 PHD_FILE: MSMg01no153_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:17 2005
(543 letters)
>mm_chr16_49524048_49524993
Length = 946
Score = 884 bits (457), Expect = 0.0
Identities = 477/485 (98%), Gaps = 3/485 (0%)
Strand = Plus / Minus
Query: 62 gtattttgagtcttttgaacaggttctatcaatgaatccacagtttcagctagaatggct 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 gtattttgagtcttttgaacaggttctatcaatgaatccacagtttcagctagaatggct 887
Query: 122 gaccaaggaggcccctgggagccacctgtctctgtcttcctgttctgtggttataggcac 181
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 886 gaccaaggaggcccctgggagccacctgtctctgtcttcctgttctggggttataggcgc 827
Query: 182 aaacaatcttgcctaacttttgcttaggttctgtggattcaaacccaggtctctgtggtt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 aaacaatcttgcctaacttttgcttaggttctgtggattcaaacccaggtctctgtggtt 767
Query: 242 gtacaacactcactttaccgttacggaatctgtctaggctctcaataaatttcatgagtc 301
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 766 gtacaacactcactttaccattacggaatctatctaggctctcaataaatttcatgagtc 707
Query: 302 tccttcagttaaccaatatttgtatccctcttcctaaatatgttttggaatatatttgta 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 tccttcagttaaccaatatttgtatccctcttcctaaatatgttttggaatatatttgta 647
Query: 362 aaatgtaaagaatgcatggacccaggattctgactcaacaggaaagacatacttttg--- 418
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 aaatgtaaagaatgcatggacccaggattctgactcaacaggaaagacatacttttgttc 587
Query: 419 ttctcaaatcaacagccatggttgaaaaccagcagcagaagagtagacacataggaacta 478
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ttctcaaatcaacagccatggctgaaaaccagcagcagaagagtagacacataggaacta 527
Query: 479 tgtttccctgtgggacacttacaagttcctaatcttttgttgatttatagcagttttcct 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tgtttccctgtgggacacttacaagttcctaatcttttgttgatttatagcagttttcct 467
Query: 539 tggca 543
|||||
Sbjct: 466 tggca 462
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 946
Length adjustment: 10
Effective length of query: 533
Effective length of database: 936
Effective search space: 498888
Effective search space used: 498888
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
