Query= MSMg01no155_h14.b1 MSMg01no155_h14.b1 CHROMAT_FILE:
MSMg01no155_h14.b1 PHD_FILE: MSMg01no155_h14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:23 2005
(409 letters)
>mm_chr16_75079973_75080781
Length = 809
Score = 671 bits (347), Expect = 0.0
Identities = 385/413 (93%), Gaps = 26/413 (6%)
Strand = Plus / Plus
Query: 1 gtaaatacaggaagatgtctgtcctttccacctatgtaccttctccttttttcattactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtaaatacaggaagatgtctgtcctttccacctatgtaccttctccttttttcattactc 260
Query: 61 ctcttttggccaaggtaagcaagtttaaaaaaatccctttcattttctttaaaacactag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcttttggccaaggtaagcaagtttaaaaaaatccctttcattttctttaaaacactag 320
Query: 121 ccatactatgcctttttctatatgtggctattcctgttcccttatccaggtaatgaacta 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 ccatactatgcctttttctatatgtggctattcctgtttccttatccaggtaatgaacta 380
Query: 181 tattgcaatattttatttaaaccacttgccaaaattttaagatttcatcattatctgtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 tattgcaatattttatttaaaccacttgccaaaattttaagatttcatcattacctgtga 440
Query: 241 gttctttcttataattttccaaaagatggtgactatgaaatatatatatatata----at 296
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 gttctttcttataattttccaaaagatggtgactatgaaatatatatatatatatagaat 500
Query: 297 tcaatttacataataattttaattatataatgtatatatgatatacatatatatgtatgt 356
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcaatttacataataattttaattatataatgtatatatgatata--------------- 545
Query: 357 gtatatatatatacatatgtatatatatatatatatatatatcttaagaatat 409
|||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 546 -tatatatatata------tatatatatatatatatatatatcttaagaatat 591
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 104
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_h14.g1 MSMg01no155_h14.g1 CHROMAT_FILE:
MSMg01no155_h14.g1 PHD_FILE: MSMg01no155_h14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:23 2005
(298 letters)
>mm_chr16_75224817_75225514
Length = 698
Score = 435 bits (225), Expect = e-126
Identities = 270/299 (90%), Gaps = 25/299 (8%)
Strand = Plus / Minus
Query: 1 ttaaccacacaatatcatttgtaaattcatggtatatatacacatataataggtgtgtgc 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 354 ttaaccacacaatatcatttgtaaattcatggtatatgtacacatataataggtgtgtgc 295
Query: 61 atgttcatgtgctagtggtatgcaagtatattcagatttctgtggacaccagggctcaac 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 294 atgttcatgtgctagtggtatgcaagtatgttcagatttctgtggacaccagggctcaac 235
Query: 121 ttctagtgccatttctaaggatggttttcatttttctttctctttttatgcctttctttc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ttctagtgccatttctaaggatggttttcatttttctttctctttttatgcctttct--- 178
Query: 181 tttctctctctctctctctctctctctctctctctctctctctctctctctttcctttct 240
|||||||||||||||||||||||||| | ||||||||||||
Sbjct: 177 ---ctctctctctctctctctctctctct-t-----------------tctttcctttct 139
Query: 241 cttttcttttcttttcttttctttcctttctcttttcttttcttttcttt-tcttttct 298
||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||
Sbjct: 138 cttttcttttcttttcttttctttcctttctcttttcttctctttcctttctcttttct 80
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
