Query= MSMg01no156_d21.b1 MSMg01no156_d21.b1 CHROMAT_FILE:
MSMg01no156_d21.b1 PHD_FILE: MSMg01no156_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:19 2005
(319 letters)
>mm_chr16_29883483_29884202
Length = 720
Score = 553 bits (286), Expect = e-162
Identities = 312/328 (95%), Gaps = 14/328 (4%)
Strand = Plus / Minus
Query: 5 gaattctcagtcttcagatcctgccgactttgaacctacttgtatctgtgtgatcacaca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gaattctcagtcttcagatcctgccgactttgaacctacttgtatctgtgtgatcacaca 580
Query: 65 cacaaacatatacacacagcagatgcacacatgtg------------cacacacacacac 112
|||||||||| ||||||| ||||||||||||||| |||||||||||||
Sbjct: 579 cacaaacatacccacacag-agatgcacacatgtgcgcacacacacacacacacacacac 521
Query: 113 cactacacttcatttgccatagtacaccctcccccataaccctgtgcagtcaggaattca 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 cactacacttcatttgccatagtacaccctcccccataaccctgtgcagtcaggaattca 461
Query: 173 attcaaagcaaaagggattcttgagga-gggggaaaaaaaaaggaattccatagtggtga 231
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 460 attcaaagcaaaagggattcttgaggaggggggaaaaaaaaaggaattccatagtggtga 401
Query: 232 ggttagggttacagcccttgaagccagatggtttcctggagacgtcaggggagctgggtg 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ggttagggttacagcccttgaagccagatggtttcctggagacgtcaggggagctgggtg 341
Query: 292 aggtggcatgggggacaccatccgggag 319
||||||||||||||||||||||||||||
Sbjct: 340 aggtggcatgggggacaccatccgggag 313
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_d21.g1 MSMg01no156_d21.g1 CHROMAT_FILE:
MSMg01no156_d21.g1 PHD_FILE: MSMg01no156_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:19 2005
(291 letters)
>mm_chr16_29736588_29737278
Length = 691
Score = 503 bits (260), Expect = e-147
Identities = 287/304 (94%), Gaps = 13/304 (4%)
Strand = Plus / Plus
Query: 1 aaacttaagggctggtgtgtgcctctaactaactctaatatagagaccaagtcctacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaacttaagggctggtgtgtgcctctaactaactctaatatagagaccaagtcctacaag 260
Query: 61 ggaaggagagatgtcttgaggtcaggacagaggaactcacttctgctgacagtgagcaag 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 ggaaggagagatgtcttgaggtcagggcagaggaactcacttctgctgacagtgagcaag 320
Query: 121 gaagggttgctggaggcagtgacactggatctctgaattggtctctgccatgcagagatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagggttgctggaggcagtgacactggatctctgaattggtctctgccatgcagagatg 380
Query: 181 ggcgaaaggacaatccagtgtggagtgacagcaggggagagagagcgagggttggttagg 240
|| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 ggtgaaaggacaattcagtgtggagtgacaacaggggagagagagcgagggttggttagg 440
Query: 241 tgaccacagagggtcaca-------------ctgattggagtcagaaagaggagattgag 287
|||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 tgaccacagagggtcacatcggttggtcacactgattggagtcagaaagaggagattgag 500
Query: 288 catc 291
||||
Sbjct: 501 catc 504
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
