Query= MSMg01no156_j21.b1 MSMg01no156_j21.b1 CHROMAT_FILE:
MSMg01no156_j21.b1 PHD_FILE: MSMg01no156_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:47 2005
(321 letters)
>mm_chr16_9107174_9107894
Length = 721
Score = 586 bits (303), Expect = e-172
Identities = 312/315 (99%)
Strand = Plus / Minus
Query: 5 gaattcatgggagaactgtggccgtgcttgtaagtgcacaagaaaatatcactggaatcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gaattcatgggagaactgtggccgtgcttgtaagtgcacaagaaaatatcactggaatcc 460
Query: 65 cttctactttcctagagttgaagaaggaagagataaagcagagacaaattgaacgagaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 cttctactttcctagagttgaagaaggaagagataaagcagagacaaattgaacgagaaa 400
Query: 125 aattggcatctctgaaaaaacaagacgaagataaagataagagggataaggaagaaaagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 aattggcatctctgaaaaaacaagacgaagataaagataagagggataaggaagaaaagg 340
Query: 185 aaagcagcagagagaagagggagtggtctcgcagctcaagaagatgcagatccagatctc 244
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 339 aaagcagcagagagaagagggagcggtctcgcagctcaagaagatgcagatccagatctc 280
Query: 245 ctactcctagaagatgatcttcccctgtcaggagagagagaaagcgcagtcactcttgat 304
|||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 279 ctacccctagaagatgatcttcccctgtcaggagagagagaaagcacagtcactcttgat 220
Query: 305 ctccccatcacagaa 319
|||||||||||||||
Sbjct: 219 ctccccatcacagaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_j21.g1 MSMg01no156_j21.g1 CHROMAT_FILE:
MSMg01no156_j21.g1 PHD_FILE: MSMg01no156_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:47 2005
(290 letters)
>mm_chr16_8936523_8937212
Length = 690
Score = 538 bits (278), Expect = e-157
Identities = 287/290 (98%)
Strand = Plus / Plus
Query: 1 ttttttgtacaagaatggaggtctgatgcttaattcacaccctttactggaagaccatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 ttttttgtacaagaatggaggtctgatgcttaattcacaccctttactgaaagaccatgc 260
Query: 61 cttgtcttgtgacttccaactcctacaaggaccagaaaggtggtgtagtctcttttaact 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgtcttgtgacttccaactcctgcaaggaccagaaaggtggtgtagtctcttttaact 320
Query: 121 gtctgtgggttctcttgtcactgagggaatggaaggagagaatgcctgagggggaaatga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 gtctgtgggttctcttgtcactgagggaatggaaggagagaatgcctgaggggggaatga 380
Query: 181 gttaataggcaagatgagcttcttgtttgagcaattgaataagcaatgtctcttcacagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttaataggcaagatgagcttcttgtttgagcaattgaataagcaatgtctcttcacagc 440
Query: 241 tgtggaaaccttaactaagacacagctcaagttggcctctaacctgttat 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtggaaaccttaactaagacacagctcaagttggcctctaacctgttat 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
