Query= MSMg01no164_c22.b1 MSMg01no164_c22.b1 CHROMAT_FILE:
MSMg01no164_c22.b1 PHD_FILE: MSMg01no164_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:57 2005
(319 letters)
>mm_chr16_20362328_20363046
Length = 719
Score = 487 bits (252), Expect = e-142
Identities = 299/320 (93%), Gaps = 12/320 (3%)
Strand = Plus / Minus
Query: 4 ggaattcactctgtagaccaggctagcctcaaacttagaagtccacctgcctctgcctcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ggaattcactctgtagaccaggctagcctcaaacttagaagtccacctgcctctgcctcc 582
Query: 64 cgagtgctgggattaaaggcgt--g-cgccaccacccagcctgttatgtga-ttttggct 119
| |||||||||||||||||||| | | ||||||||| ||||||||||||| ||||||||
Sbjct: 581 caagtgctgggattaaaggcgtaagccaccaccacccggcctgttatgtgatttttggct 522
Query: 120 gttttgtttgtttgtttgttttttaacatattgcaaagataaaaataaggcaaatgaact 179
|| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 521 gt--------tttgtttgtttttaaacatattgcaaagataaaaataaggcaaatgaact 470
Query: 180 ccaaagagggtgtctctgtggatgcccaggcttctgtctagactcaccagctgactgtgt 239
||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 469 ccaaagagggtgtctttgtgcatgcccaggcttctgtctagactcaccagctggctgtgt 410
Query: 240 gccacacagtcttctaaggtgcacagggctgtgctgtctcttacagcacttcctggaagt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gccacacagtcttctaaggtgcacagggctgtgctgtctcttacagcacttcctggaagt 350
Query: 300 gtttttcctacttgtttaca 319
||||| |||||||| |||||
Sbjct: 349 gttttccctacttgcttaca 330
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_c22.g1 MSMg01no164_c22.g1 CHROMAT_FILE:
MSMg01no164_c22.g1 PHD_FILE: MSMg01no164_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:58 2005
(615 letters)
>mm_chr16_20186248_20187262
Length = 1015
Score = 1137 bits (588), Expect = 0.0
Identities = 609/616 (98%), Gaps = 2/616 (0%)
Strand = Plus / Plus
Query: 1 tgccttccagcctatcgcatcaagctgcaaaattgtgccacaaagtcaggtgcctaatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgccttccagcctatcgcatcaagctgcaaaattgtgccacaaagtcaggtgcctaatcc 260
Query: 61 cgagtcacctggcaagtcctttcagccaatcaccatgagctgtaagattgtctcaggtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgagtcacctggcaagtcctttcagccaatcaccatgagctgtaagattgtctcaggtat 320
Query: 121 gcagagcaggtgctggagatagtgtgggtggctcttactaggtggggaaatcagactatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcagagcaggtgctggagatagtgtgggtggctcttactaggtggggaaatcagactatc 380
Query: 181 aaactggcctggaaatttctgtgtggcaccggcgggccaggaactcagggtgttccttgc 240
|||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||
Sbjct: 381 aaactggcctggaaatttctgtgtagcaccggctggccaggaattcagggtgttccttgc 440
Query: 241 ccagccttgcaaatgctgagattacagatgagaactaccatacccagctcggagatgctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccagccttgcaaatgctgagattacagatgagaactaccatacccagctcggagatgctt 500
Query: 301 ctacactgccatgcgtatcaaaggacagttaaccactgttgg-aaggcaaagctgtccca 359
||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 501 ctacactgccatgtgtatcaaaggacagttaaccactgttggtaag-caaagctgtccca 559
Query: 360 aagaaaagcacaggtcatttaaatggaacaaatttctgaatagggtgaagaaatgaggtc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aagaaaagcacaggtcatttaaatggaacaaatttctgaatagggtgaagaaatgaggtc 619
Query: 420 caaggtatttattccagttttcccctggcaaatgtgtgttctgctatattttaagattag 479
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 620 caaggtatttattccagttttcccctggcaaatgggtgttctgctatattttaagattag 679
Query: 480 agttgagaaatctttgacttcttctaagggttgagttggtgtggaattgaattgcctttt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agttgagaaatctttgacttcttctaagggttgagttggtgtggaattgaattgcctttt 739
Query: 540 atttttctctatccattgctagagcattgttgatcttatgagcagtcattctgagacttc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atttttctctatccattgctagagcattgttgatcttatgagcagtcattctgagacttc 799
Query: 600 cattttgctgaggggc 615
||||||||||||||||
Sbjct: 800 cattttgctgaggggc 815
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space: 608025
Effective search space used: 608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
