Query= MSMg01no164_m19.b1 MSMg01no164_m19.b1 CHROMAT_FILE:
MSMg01no164_m19.b1 PHD_FILE: MSMg01no164_m19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:45 2005
(313 letters)
>mm_chr16_69685176_69685888
Length = 713
Score = 584 bits (302), Expect = e-171
Identities = 308/310 (99%), Gaps = 2/310 (0%)
Strand = Plus / Plus
Query: 4 ggaattcacaattatcttatttaatcctgcagctcttataatttctctacctccagtcac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcacaattatcttatttaatcctgcagctcttataatttctctacctccagtcac 263
Query: 64 agcctgaatcccaggtggttataatatcaactgctgactgtggaagaagaaggaatacaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agcctgaatcccaggtggttataatatcaactgctgactgtggaagaagaaggaatacaa 323
Query: 124 ctcaggccttcatgtttgaggagaaaaatggaaaataggactgatattcagagaatccag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 324 ctcaggccttcatgtttgaggagaaaaatggaaaataggactgatattcagagaa-ccag 382
Query: 184 gcatgggtacaatgattatcagacttttattatgatttttttt-gattctcacattaatc 242
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 383 gcatgggtacaatgattatcagacttttattatgatttttttttgattctcacattaatc 442
Query: 243 tcatgtttcaaaggagtatttaaaattcattagagccatgggggactttgaatttggatc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcatgtttcaaaggagtatttaaaattcattagagccatgggggactttgaatttggatc 502
Query: 303 atcctgcctt 312
||||||||||
Sbjct: 503 atcctgcctt 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_m19.g1 MSMg01no164_m19.g1 CHROMAT_FILE:
MSMg01no164_m19.g1 PHD_FILE: MSMg01no164_m19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:45 2005
(284 letters)
>mm_chr16_69809192_69809875
Length = 684
Score = 518 bits (268), Expect = e-151
Identities = 280/284 (98%)
Strand = Plus / Minus
Query: 1 caaagaacttactgaaccctaattgacaataacttcttcagctatttttccacctatttt 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 caaagaacttactgaactctaattgacaataacttcttcagctatttttccacctatttt 425
Query: 61 caggatatgaccacttgaaacattcatccttataaagtttagttttctaaatttgggtcc 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 caggatatgtccacttgaaacattcatccttataaagtttagttttctaaatttgggtcc 365
Query: 121 ttataaatttcttccacatcaatttacatgtagagatataaaattttctcttggagtcct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 atataaatttcttccacatcaatttacatgtagagatataaaattttctcttggagtcct 305
Query: 181 aaatatataaaagtatcagcattttgcctgtcctcaagctcataaccaactgtgtaacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aaatatataaaagtatcagcattttgcctgtcctcaagctcataaccaactgtgtaacct 245
Query: 241 actttattcaacaagcaagaaaacaccagacttcacaacactca 284
|||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 244 actttattcaacaaacaagaaaacaccagacttcacaacactca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
