Query= MSMg01no166_n15.b1 MSMg01no166_n15.b1 CHROMAT_FILE:
MSMg01no166_n15.b1 PHD_FILE: MSMg01no166_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:28 2005
(316 letters)
>mm_chr16_86486770_86487487
Length = 718
Score = 574 bits (297), Expect = e-168
Identities = 307/311 (98%), Gaps = 2/311 (0%)
Strand = Plus / Plus
Query: 5 gaattcctgacagatgatgctgaaaagccaacttatagtaagatgttgactgcttgtatt 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctgacagacgatgctgaaaagccaacttatagtaagatgttgactgcttgtatt 264
Query: 65 cagctgcatatgagaagtttatgatgaaaaaaatgtatatttt--ttttagtatcttatt 122
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 265 cagctgcatatgagaagtttatgatgaaaaaaatgtatatttttgttttagtatcttatt 324
Query: 123 tatatcttcatttcatgcaagtgttcttatttcagtgataaattgcctcaaatatatgtg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatatcttcatttcatgcaagtgttcttatttcagtgataaattgcctcaaatatatgtg 384
Query: 183 aaagaaaaacatttataaattaaaactgtttatttgattgattacttataagatttagga 242
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaagaaaaatatttataaattaaaactgtttatttgattgattacttataagatttagga 444
Query: 243 atttgaacagaattccatgcattcttttcagaacacatgaagaagtatagttccgaggtt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atttgaacagaattccatgcattcttttcagaacacatgaagaagtatagttccgaggtt 504
Query: 303 gtggaaaatca 313
|||||||||||
Sbjct: 505 gtggaaaatca 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 718
Length adjustment: 9
Effective length of query: 307
Effective length of database: 709
Effective search space: 217663
Effective search space used: 217663
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_n15.g1 MSMg01no166_n15.g1 CHROMAT_FILE:
MSMg01no166_n15.g1 PHD_FILE: MSMg01no166_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:28 2005
(555 letters)
>mm_chr16_86546204_86547157
Length = 954
Score = 1004 bits (519), Expect = 0.0
Identities = 546/555 (98%), Gaps = 1/555 (0%)
Strand = Plus / Minus
Query: 1 aaaacaatgttctcatcaccttggctctaatgatcttgtggttttaattattaaaattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 aaaacaatgttctcatcaccttggctctaatgatcttgtggttttaattattaaaattaa 757
Query: 61 ttcataagaactgctgtacaagataattatcgatggaaacacatttatctcagagtcctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ttcataagaactgctgtacaagataattatcgatggaaacacatttatctcagagtcctg 697
Query: 121 tgaagtagatagagaagacaaagagaataaaatccttattgttatttgagagaaacattc 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tgaagtagatagagaagacaaggagaataaaatccttattgttatttgagagaaacattc 637
Query: 181 ttctggtagatccaagaacatgaggcagaaggagttcagcagaggtaactaaggagtcaa 240
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 636 ttctggtagatccaagaacgtggggcagaaggagttcagcagaggtaactaaggagtcaa 577
Query: 241 gaaagtaagatggagcaccaaaacagctggaactaccttttagaaagtatcttccaaaaa 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gaaagtaagatggaacaccaaaacagctggaactaccttttagaaagtatcttccaaaaa 517
Query: 301 gcagaagaaaaagataccatttctttaaagtcacagataacccgacgaaaaaaccatata 360
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 516 gcagaagaaaaagataccatttctttaaagtcacagataacttgatgaaaaaaccatata 457
Query: 361 agaagccattgaaccattacagatagcagaaataaaaatagccagtatgatcacatcaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 agaagccattgaaccattacagatagcagaaataaaaatagccagtatgatcacatcaga 397
Query: 421 gaatcaaatggaaacagagaaaaaaaatcaacagtgcatgatagcccagatggtgtaaca 480
||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 396 gaagcaaatggaaacagagaaaaaaa-tcaacagtgcatgatagcccagatggtgtaaca 338
Query: 481 agtgtttgtaacacacaaaattaattttatagcatgtgtctgacctgaggttaatatccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 agtgtttgtaacacacaaaattaattttatagcatgtgtctgacctgaggttaatatccc 278
Query: 541 aaaactgataacaaa 555
|||||||||||||||
Sbjct: 277 aaaactgataacaaa 263
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 954
Length adjustment: 10
Effective length of query: 545
Effective length of database: 944
Effective search space: 514480
Effective search space used: 514480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
