Query= MSMg01no168_m11.b1 MSMg01no168_m11.b1 CHROMAT_FILE:
MSMg01no168_m11.b1 PHD_FILE: MSMg01no168_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:15 2005
(409 letters)
>mm_chr16_52457584_52458393
Length = 810
Score = 741 bits (383), Expect = 0.0
Identities = 398/403 (98%), Gaps = 1/403 (0%)
Strand = Plus / Minus
Query: 5 gaattc-tcaaagttgattcaaacttcacccataagttcccccacacttggacccatccc 63
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gaattcatcaaagttgattcaaacttcacccataagttcccccacacttggacccatccc 548
Query: 64 aaataccctgcactcacagcctgaaagaacgtttagataatatttttggtgctactgtgt 123
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 aaatgccctgcactcacagcctgaaagaacgtttagataatatttttggtgctactgtgt 488
Query: 124 tttggctttgacttgccttctgaggtcaagtatacaatcttctgtatgttgttgcatcat 183
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 487 tttggctttgacttgccttctgaggtcaggtatacaatcttctgtatgttgttgcatcat 428
Query: 184 tagcacttaatgcggttcaatgatgaggcaggcatttagcgttttagatgtcaggttagg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tagcacttaatgcggttcaatgatgaggcaggcatttagcgttttagatgtcaggttagg 368
Query: 244 aattacaagcttgtatttcactgggcttccctttatagtgagaacttagagccatccgtt 303
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aattataagcttgtatttcactgggcttccctttatagtgagaacttagagccatccgtt 308
Query: 304 gtctgtattctgtaaaaaattcttcaccacctgtcattcattcacaattatttttgggat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 307 gtctgtattctgtaaaaaattcttcaccacctgtcattcattcacaattatttatgggat 248
Query: 364 gtacagtctatttgtaaaatacaacttgtcttaggtaaggttt 406
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gtacagtctatttgtaaaatacaacttgtcttaggtaaggttt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 810
Length adjustment: 9
Effective length of query: 400
Effective length of database: 801
Effective search space: 320400
Effective search space used: 320400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no168_m11.g1 MSMg01no168_m11.g1 CHROMAT_FILE:
MSMg01no168_m11.g1 PHD_FILE: MSMg01no168_m11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:15 2005
(374 letters)
>mm_chr16_52322222_52322993
Length = 772
Score = 650 bits (336), Expect = 0.0
Identities = 364/374 (97%), Gaps = 4/374 (1%)
Strand = Plus / Plus
Query: 1 tctagttaaaaacttggccaacatagtgaaaataatgaacaaaatgttactttaaatttg 60
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctagttagaaacttggccaatatagtgaaaataatgaacaaaatgttactttaaatttg 260
Query: 61 tccattctcttaattcattttttcacattagatcattcctttcctggggacttattttga 120
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 261 tccattctcttaattcattttt-cacattagatcgttcctttcctggggacttattttga 319
Query: 121 actacttgtactaaagaagaagtgaaaaaaaaaaacccaaacaaacaaaaaaa-ccccta 179
||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 320 actacttgtactaaagaagaagtgaaaaaaaaa--cccaaacaaacaaaaaaaaccccta 377
Query: 180 tttttgaacacttccagtgtttaaataatgcaattatttaggcatcttctcagcaggaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tttttgaacacttccagtgtttaaataatgcaattatttaggcatcttctcagcaggaaa 437
Query: 240 ctccaggtttaactagttaggagtatcattgctatgtcaatggatagaaaccctgtagag 299
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ctccaggttttactagttaggagtatcattgctatgtcaatggatagaaaccctgtagag 497
Query: 300 tttaccatgtaagtaatttgaaattgtttatacagttgaattactttagcaagaagaata 359
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 498 tttaccatgtaagtaatttgaaattgtggatacagttgaattactttagcaagaagaata 557
Query: 360 gcagtactgtattc 373
||||||||||||||
Sbjct: 558 gcagtactgtattc 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 772
Length adjustment: 9
Effective length of query: 365
Effective length of database: 763
Effective search space: 278495
Effective search space used: 278495
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
