Query= MSMg01no170_a14.b1 MSMg01no170_a14.b1 CHROMAT_FILE:
MSMg01no170_a14.b1 PHD_FILE: MSMg01no170_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:53 2005
(316 letters)
>mm_chr16_30856552_30857267
Length = 716
Score = 565 bits (292), Expect = e-165
Identities = 307/312 (98%)
Strand = Plus / Minus
Query: 5 gaattctttcaagacataaatgcaagcagataaaaagcacaggaggccaggtgatgcctg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gaattctttcaagacataaatgcaagcagataaaaagcacaggaggccaggtgatgcctg 457
Query: 65 tggaactcagaggccaggaagcggctgcatattgctaactgtgttggctgggcacagctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tggaactcagaggccaggaagcggctgcatattgctaactgtgttggctgggcacagctg 397
Query: 125 cataggaagtcagccgtgggaaggaaggagagatgctacctaatggaggtgttctaggtg 184
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 396 cataggaagtcagccgtgggaaggagggagagatgccacctaatggaggtgttctaggtg 337
Query: 185 gtgctcaggaaaagggcaccccctaaaagagaaagcaaaggcatccttcaaagatgggga 244
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 336 gtgctcaggaaaagggcaccccccaaaagagaaagcaaaggcatccttcaaagatgggga 277
Query: 245 tttggtggtggcactcacatacattccatcccagtcctagaaggctgaagcaggaggcca 304
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 276 tttggtggtggcactcacatacactccatcccagccctagaaggctgaagcaggaggcca 217
Query: 305 gtaaactccaag 316
||||||||||||
Sbjct: 216 gtaaactccaag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no170_a14.g1 MSMg01no170_a14.g1 CHROMAT_FILE:
MSMg01no170_a14.g1 PHD_FILE: MSMg01no170_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:53 2005
(277 letters)
>mm_chr16_30697671_30698347
Length = 677
Score = 487 bits (252), Expect = e-142
Identities = 267/272 (98%), Gaps = 2/272 (0%)
Strand = Plus / Plus
Query: 1 tctccagctggctagtaatttctattaaatcccaaatgatcatgtgtggggttcctgctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctccagctggctagtaatttctattaaatcccaaatgatcatgtgtggggttcctgctg 260
Query: 61 gctttcaaagaacgcaggccagcaaaacacaaaagcatc-gggaaaatttctcagctcag 119
|||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||
Sbjct: 261 gctttcaaagaacgcaggccagcagaacacaaaagcatctgggaaa-tttctcagctcag 319
Query: 120 gaagctcaagcccttttttctttaatttttaaataactcattccagatttagcaaaagat 179
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtagctcaagcccttttttctttaatttttaaataactcattccagatttagcaaaagat 379
Query: 180 ccattcaaggagcctggcgaggcagcctgagttgacaactctgtttctgaacaatccatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ccattcaaggagcctggcgaggcagcctgagttgacaactctgtttctgaacaatccatt 439
Query: 240 acttattcagggccagccactcagccagcagg 271
|||||||||| |||||||||||||||||||||
Sbjct: 440 acttattcagtgccagccactcagccagcagg 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
