Query= MSMg01no171_i10.b1 MSMg01no171_i10.b1 CHROMAT_FILE:
MSMg01no171_i10.b1 PHD_FILE: MSMg01no171_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:46 2005
(185 letters)
>mm_chr16_76468602_76469188
Length = 587
Score = 331 bits (171), Expect = 2e-95
Identities = 180/183 (98%), Gaps = 2/183 (1%)
Strand = Plus / Minus
Query: 5 gaattcagttttgatt-acaaattctgttatatggttgaagaaaatattaactaatttgt 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gaattcagttttgattaacaaattctgttatatggttgaagaaaatattaactaatttgt 328
Query: 64 taagaattataaccggactagtgggagggggaagggtagaattgtgaataatc-aaaaaa 122
|||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 327 taagaattataagcggactagtgggagggggaagggtagaattgtgaataatcaaaaaaa 268
Query: 123 atttgcatgaaaattctagttcattaagtaatcagcatgggggtgtctgattggctgatt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atttgcatgaaaattctagttcattaagtaatcagcatgggggtgtctgattggctgatt 208
Query: 183 aga 185
|||
Sbjct: 207 aga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 185
Length of database: 587
Length adjustment: 8
Effective length of query: 177
Effective length of database: 579
Effective search space: 102483
Effective search space used: 102483
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no171_i10.g1 MSMg01no171_i10.g1 CHROMAT_FILE:
MSMg01no171_i10.g1 PHD_FILE: MSMg01no171_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:46 2005
(294 letters)
>mm_chr16_76297544_76298237
Length = 694
Score = 538 bits (278), Expect = e-157
Identities = 287/290 (98%)
Strand = Plus / Plus
Query: 1 taaaaaaataaaatatgaaaacatttatggaatcttgatcatatggttaacaccgaaatt 60
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 201 taaaaaaataaaatatgaaaacatttatggaatcttgatcatatggttaagatagaaatt 260
Query: 61 tcaacatggaatgctttagtgaaacacatatcaatgtttgaattataagagtatattttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaacatggaatgctttagtgaaacacatatcaatgtttgaattataagagtatattttc 320
Query: 121 aaaaggggttgcaagtagttcacatgtgagcagtttatgaatgagcataatgttcattct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaggggttgcaagtagttcacatgtgagcagtttatgaatgagcataatgttcattct 380
Query: 181 ttgaagtagctagattatttccaaagcaatgttttatattctccattacttttggtttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgaagtagctagattatttccaaagcaatgttttatattctccattacttttggtttaa 440
Query: 241 gatacataataaagactactatccagttgcttttagattcagtatctgta 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatacataataaagactactatccagttgcttttagattcagtatctgta 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
