| BAC end | BAC-end 1 | BAC-end 2 |
|---|
| end name | MSMg01-176J04.T7 (MSMg01no176_j04.b1) | MSMg01-176J04.TJ (MSMg01no176_j04.g1) |
|---|
| ACC | AG371231 | AG371232 |
|---|
| length | 1,174 | 1,167 |
|---|
length of high quality
(start - end) | 127 (143 - 269) | 122 (439 - 560) |
|---|
| definition | CHROMAT_FILE: MSMg01no176_j04.b1 PHD_FILE: MSMg01no176_j04.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:48:29 2005 | CHROMAT_FILE: MSMg01no176_j04.g1 PHD_FILE: MSMg01no176_j04.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:48:29 2005 |
|---|
| singlet/doublet | doublet | doublet |
|---|
| BLAST hit | unique | unique |
|---|
| Map location. | (42,045,359 - 42,045,475) | (41,876,452 - 41,876,573) |
|---|
| sequence | AAACCGTCAAGTTCCCCCNANAAAGAGAAAGGGANAANGGAGAGGCGTGT
AGGTCCTCCCGGNNANGGNANNANGAANGGANAAANANNANNANGGNAGG
GANAGGNNNNNNAGGACCCTTGAGAAGTGTCCCTCGAANAAATTTGATTC
TGGACTGTGTTTGTTTCACTCTACCCCTTTGGCTTCTATTGAGCAATAAA
GGAAGATAAAAGTCTTGGTCCTTGACTGTGGGCCTTGCCTCCAGATCTGT
ACAAAATGATTTTTTTTTGANGAGAGNCAGACGGCNACAGGCAANGAAAG
CAACAACAGAGGGAGACAAGAGACAGAGACCTTTTTTTTTTTCACNAAAG
GCACAGGCACCNAAACGCGAGGAAAAAAACCCCCCCCATTTTTTCCCCCC
CCACCNTTAGAAGGNAGAACCTAAAAAAAGAAAAGTGGGTCTTTGTATTA
AGATCCTGAGCTCTCGAGTTTGACACACCTTTGAATCTATGCTCTGCTAC
CTGGGGATGGATGCAACGTGACTGGACAATCTCTTGCTCCTGTCAGAAGC
CTTCCATGACTGCTTCCATGTCATTCCCACCATCAAAGGAAGAACCCCTC
GGGCAGAAAAAGGCCAAGTAAAACTATTCCGAAGACTTGCCGTTGTCAGG
CAATATTATCTCATGAATGGATAAGCCACTAAGGGAAAAGGGAAGAGGGA
AAGATTTTTTTTTTTTTTTTTTCACGAGAAAACCAGAAAAAGAACAGCGG
CGAGCAAAACAAAAAAGCGGGAGGAGGAAGGAACAAAAGCCTATTATGTT
TTTATTATAACAAATCAGGGCGAGGGCCCACACAAAATTAATTATTTTGT
TATAAAGGCAAAGGAAACCTACAAAAGAATGGATAAGGGGAAACGGAAAG
TCACCAAGAACCGAATCAAGGGAAACGAAAAACAAAAAAGGTCCAAAAAC
ATGGGTGGAAACTCTAAAATTCAGAGTATAGGCAGGGAAATAAACAAAAG
GGCTGGCCAGATACAACCTCCAACAAAAAAAACCCGGATCTGATGCGGCC
CAAACCGCAGACATGATGATTATAACTAAAAGATATGACATATACACATG
GATTAAAAATACACAGGTACATATAGAACATCAACTCACACAAGCTAGGC
ACCATAACGCAATAATTATTCCAT
| GAAACCTCAGTCCCCCCCCCNNNNAGNNNNNNNGAGANNGNAGGCCCTGG
AGCACCCCCCCNANNNNNNNNGNAGGANAANNNGNNNNAGNNAGGNAAGG
AANNNANNGGNNNANCCCTCTTAAAAANTTGCTCACAGANANATANAGGA
ATAATTTNNAAAGAAGTATTGGGGATNTGGATAGNCTGGGTATGGTGAAA
NATANANANANATANANANANAAATATATATAAATATANATATAAANATA
NAATGAATATTATTTTTTTTTTGGNANANNATGANNGNAGAAGANNNAGA
AANTGANATANTGGANTAGAAAGGATNAGNAAATTATTTTATTTNNANGN
ANNANANAANANNNNAAAGGGAGAAAAAAAAAGCCCCCCCTTTTTTTCCC
CCCCAAAAAAANAATTACCAGTTTCAAAAAAAAGGGGAGTGGAGGAAGAT
TAATCTTCTCTCCGCCATAGGAAACCAAATTAACCTATTTCACTCAAGAT
GAGTGGGGGTAAAATTGATTACAACCCGGTCTTAAAGATCCTGTAAATCC
AAAAGTTGGGTCATGTTGCGAAAGGAGTTTTGTTCTCAAACGGATGACTT
TTAAGTATGGGATAGAATATGTTCACTTGATTCCTTGAACAGAGCCATTA
TGATAAGAGAGAATATAAAAGAAATCATTGAGGATCCAACAAAGGCCACC
CAAGACATTTTTTTTTTTTTTTATAACAACGAAAGCCCCCAAACCGGGGG
AAACACGACCAAAAACCCCAAGGACCCCAAAAGCCCCCAAGGAACTATTT
TTATTTTCAAAACATAACAGGGAAAAAAAAGGCAGGGTATTATTTTTTCA
TAACCCCAAAAAATGAAGGAATAAAAAAGGCGGACCCTGAACTTTCAAAG
CACATAAAAAAAAAATGGGGAACCTCACCCTCACAAAAAAACCCCCACTC
AAAGGAAACGAATAAATAATAACTCATACTGCCCCTAAAATAAAATGGCT
ACACGACTACTTTCTAGAAAGCACAAAAAAGAAAAATAATGGCGAACGAC
CTATAAGGGAACAAAAGCAAAGGACTTTTTCAATATTAATCTGAACTAAC
TGTGACAAAAAACTTCACTTTTCAAAAATCCGATAAAATAAAACGCTTTA
ACATTAACACACATAAT
|
|---|
| quality values | Open.Hide. 6 6 6 6 3 3 3 6 6 6 6 6 6 10 9 9 9 3 0 3 0 3 17 11 14 14 28 34 41 34 59 23 10 3 0 3 3 0 3 7 7 15 9 9 9 9 6 6 6 6
6 6 10 9 11 10 10 10 9 9 12 3 0 0 3 0 3 3 0 3 0 0 3 0 3 23 3 0 3 25 3 0 3 25 3 0 3 0 0 3 0 0 3 0 3 3 0 3 22 27
27 3 0 3 27 3 0 0 0 0 0 0 3 17 10 6 6 6 6 6 9 9 12 9 9 9 9 9 9 10 8 8 8 6 6 8 19 3 0 3 9 9 11 22 22 39 39 39 47 35
28 28 19 25 12 19 12 28 26 39 32 32 30 22 31 29 29 32 33 36 40 36 32 32 42 43 41 37 23 24 18 18 34 37 37 36 43 46 46 57 59 57 43 43 39 57 22 22 9 9
9 15 21 41 44 44 43 43 44 44 44 30 23 23 30 30 36 32 32 35 39 42 46 46 43 33 23 29 15 15 13 14 28 14 25 29 33 40 47 57 48 57 57 57 39 39 31 31 25 25
25 37 37 41 41 33 21 14 10 10 10 14 25 36 41 36 36 19 23 3 0 3 10 10 10 3 0 3 9 9 9 9 9 9 3 0 3 6 6 7 7 6 8 3 0 3 7 7 8 12
10 15 6 6 8 8 10 19 19 14 13 13 20 16 15 9 9 9 10 16 22 19 8 6 6 8 8 19 30 30 22 12 12 17 19 19 19 26 26 16 16 7 7 7 3 0 3 12 12 21
12 10 10 9 15 18 12 12 12 9 3 0 3 9 7 6 6 8 6 6 7 12 12 20 20 34 25 21 14 11 10 9 10 10 11 10 9 9 7 8 8 8 7 8 9 11 16 15 10 10
9 12 13 11 3 0 3 22 12 13 18 23 23 3 0 3 18 18 22 12 11 11 11 12 12 11 10 15 9 9 9 10 10 12 9 9 9 14 10 12 12 21 21 15 16 10 10 10 10 10
8 9 11 11 17 30 30 46 34 21 12 9 8 8 6 6 8 19 17 36 28 28 30 28 32 37 30 30 30 37 15 13 8 8 8 10 19 34 40 34 34 28 28 28 32 23 17 10 10 10
12 19 28 28 28 32 20 20 20 25 21 13 13 8 10 6 6 8 6 9 13 17 15 14 6 6 8 19 20 36 36 35 37 31 19 15 12 11 11 21 16 19 12 15 12 14 14 30 15 15
15 17 17 13 11 11 11 23 13 13 16 13 10 10 9 12 12 17 17 14 18 11 11 11 13 13 18 18 18 11 11 13 18 19 25 28 23 19 10 10 10 10 8 8 8 8 10 21 22 15
11 11 9 9 9 9 9 9 10 10 14 8 8 8 13 13 15 20 24 24 18 18 11 11 11 9 9 8 8 13 13 10 10 15 13 12 12 12 13 10 10 10 10 17 16 14 14 13 16 13
12 10 8 8 8 8 8 8 11 6 6 8 8 10 11 10 10 11 8 15 9 9 12 12 6 8 8 8 11 23 20 16 11 8 8 10 10 17 11 9 9 9 10 10 12 13 13 14 13 12
11 8 8 10 10 7 6 8 10 10 11 8 9 9 16 18 23 23 29 13 12 9 9 11 12 13 13 13 15 14 14 11 15 18 14 12 16 11 11 11 17 11 11 11 9 10 8 7 6 8
8 11 11 10 10 10 14 16 10 9 9 10 10 11 10 13 9 9 9 9 11 12 11 10 11 11 11 11 11 11 6 8 8 8 8 8 14 10 10 8 8 6 7 10 8 8 7 7 7 8
8 11 8 10 10 9 10 11 17 11 10 11 14 11 11 10 9 10 9 9 6 6 6 7 10 8 9 10 10 8 8 8 8 8 8 10 10 13 9 10 9 9 12 12 13 13 9 9 9 8
8 8 9 12 12 10 10 10 10 8 10 8 8 8 8 8 8 8 8 12 8 8 10 10 10 11 8 10 6 6 8 8 8 6 6 8 8 9 10 12 16 19 15 11 10 13 10 9 9 10
10 9 9 12 14 10 10 10 12 9 9 10 9 9 9 16 18 19 20 18 17 9 11 8 10 10 10 12 12 11 11 11 9 10 10 10 11 11 11 11 10 13 13 15 15 15 10 10 8 8
8 8 8 8 8 8 8 7 8 8 8 9 9 10 19 13 13 11 12 10 10 10 10 8 8 10 10 9 9 10 10 10 13 11 8 8 8 10 8 7 7 10 8 10 10 9 8 8 9 9
9 9 11 8 8 6 6 8 8 8 9 6 6 8 9 8 8 13 10 10 8 8 8 8 8 14 13 20 22 16 21 15 10 8 8 8 8 8 9 9 9 9 8 8 8 8 8 8 10 9
9 16 15 12 8 8 6 6 8 8 8 11 10 8 8 8 10 11 13 18 17 15 8 8 8 13 10 8 11 8 8 6 6 6 6 8 8 6 6 6 6 8 8 6 6 8 8 8 8 8
8 8 8 7 9 9 8 8 8 8 8 10 10 9 9 9 9 10 10 12 8 8 8 8 7 7 6 8 8 8 9 9 9 9 10 9 10 11 8 8 8 8 8 8 8 10 8 8 6 6
8 8 8 6 6 8 8 8 8 8 9 8 8 8 8 8 12 10 10 8 8 8 8 7 | Open.Hide. 3 3 3 6 3 6 6 9 9 9 9 9 9 12 14 12 11 8 8 3 0 0 0 0 3 3 0 0 0 0 0 0 0 3 23 23 3 0 0 3 0 3 9 9 9 9 9 3 3 3
6 6 6 6 6 7 8 8 9 8 3 0 3 0 0 0 0 0 0 0 0 3 0 3 27 25 3 0 3 3 0 0 0 3 0 0 0 0 3 3 0 0 3 9 3 0 3 6 6 8
21 3 0 0 0 3 0 0 3 3 0 0 0 3 0 3 6 6 6 7 7 8 11 11 11 23 3 0 3 9 15 12 12 9 12 16 25 27 3 0 3 0 3 27 3 0 3 27 27 37
18 9 9 9 7 14 3 0 0 3 20 11 11 12 21 22 23 25 28 31 41 41 44 29 27 3 0 3 23 23 41 27 27 3 0 3 7 7 9 9 16 16 9 9 9 9 9 7 7 3
0 3 16 3 0 3 0 3 0 3 0 3 9 3 0 3 0 3 0 3 0 3 12 9 16 9 8 7 8 8 6 6 7 7 9 6 6 3 0 3 9 9 16 9 9 3 0 3 12 3
0 3 18 18 25 21 21 12 10 8 8 8 9 12 19 12 14 8 8 9 15 19 15 3 0 3 0 3 0 0 3 6 10 3 0 0 3 0 3 17 8 8 8 3 0 0 0 3 7 7
7 3 0 3 23 3 0 3 9 3 0 3 20 22 3 0 3 23 23 37 59 59 59 27 23 3 0 3 3 0 3 15 10 10 9 9 7 13 13 3 3 3 8 3 0 0 3 0 3 0
3 0 0 3 0 3 0 3 3 0 3 0 0 0 0 3 9 9 11 9 8 8 7 7 8 8 19 21 24 21 16 10 10 10 12 12 10 9 9 9 9 12 12 25 22 18 22 15 21 18
16 12 14 12 11 11 21 23 27 25 3 0 3 19 19 37 37 30 32 28 23 23 12 12 10 10 15 10 10 10 13 18 11 11 11 12 17 18 11 21 23 37 39 39 23 23 11 11 11 12
11 11 11 23 22 26 37 37 35 28 30 28 29 15 26 13 28 28 43 39 40 39 42 43 43 29 30 19 23 28 30 30 23 23 23 32 32 46 43 43 43 43 43 42 43 42 39 39 36 39
39 39 35 39 35 39 37 32 32 30 39 37 43 48 48 41 39 39 33 33 28 28 24 25 31 31 35 28 28 29 30 30 33 31 31 19 22 17 29 31 30 37 25 25 24 33 28 30 30 43
39 39 37 37 37 37 34 28 18 15 10 10 10 14 12 9 8 8 6 8 13 15 22 25 16 19 21 21 19 25 21 24 28 21 28 23 22 13 11 8 8 8 10 10 8 8 12 16 23 28
28 32 26 30 21 21 15 15 15 20 11 11 11 16 16 20 21 15 15 21 16 11 10 12 12 12 19 26 20 19 12 10 10 12 10 13 13 18 16 27 22 21 16 8 8 8 11 13 15 10
10 10 11 14 11 11 11 11 11 8 8 8 8 8 8 8 8 10 10 12 12 11 9 8 8 10 10 14 18 29 24 25 19 18 10 9 9 10 8 7 9 12 10 9 9 12 10 10 10 15
7 7 8 6 8 8 8 8 8 8 18 23 23 19 19 32 30 19 19 19 17 9 10 9 9 9 9 8 8 8 6 6 6 7 9 10 10 11 10 8 8 8 6 6 10 6 10 8 6 6
8 8 8 7 8 6 8 8 8 10 10 17 13 12 15 12 12 10 10 10 8 8 9 9 9 9 12 21 24 32 24 15 11 12 12 13 11 10 8 8 8 10 8 10 12 11 11 12 23 19
19 8 8 8 13 15 9 15 15 11 11 6 7 8 8 9 9 8 8 7 7 7 8 13 9 10 10 13 12 11 9 8 8 8 8 8 8 9 9 8 8 6 6 8 8 14 12 10 10 9
9 9 13 17 13 12 11 19 13 13 10 10 10 10 13 10 8 8 8 9 8 12 12 9 9 10 8 10 8 8 8 8 8 8 8 8 8 8 9 9 11 18 19 10 8 8 8 10 8 8
8 10 8 8 8 8 8 9 9 9 11 14 12 13 13 10 9 9 9 9 10 8 8 8 8 8 8 10 10 8 9 10 10 8 10 10 19 19 22 21 11 10 10 12 12 9 8 8 8 8
8 8 10 10 13 9 10 10 9 9 8 8 6 6 8 8 11 13 10 10 8 8 8 10 10 8 8 6 6 10 8 8 8 8 8 10 11 8 9 9 8 9 8 8 8 8 8 8 8 8
8 8 8 10 10 10 10 10 10 11 10 10 12 13 10 10 10 10 10 10 12 8 8 8 8 8 8 8 8 8 8 10 11 8 13 15 14 10 10 8 8 8 8 8 8 11 8 8 8 8
8 8 6 6 8 8 9 9 9 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 9 10 10 12 12 12 16 10 10 10 10 10 9 9 11 11 12 8 12
9 9 6 6 6 6 8 8 10 8 8 6 6 8 8 8 8 8 8 8 8 8 6 7 10 10 8 8 8 8 8 8 6 10 8 10 6 8 7 6 8 8 10 8 8 8 8 8 15 9
9 8 8 8 8 8 8 8 11 12 12 11 9 9 9 9 9 |
|---|
