Query= MSMg01no184_f01.b1 MSMg01no184_f01.b1 CHROMAT_FILE:
MSMg01no184_f01.b1 PHD_FILE: MSMg01no184_f01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:38 2005
(312 letters)
>mm_chr16_26732355_26733063
Length = 709
Score = 555 bits (287), Expect = e-162
Identities = 303/311 (97%), Gaps = 7/311 (2%)
Strand = Plus / Minus
Query: 4 ggaattcatttcacaccgtgatgaacaaaagcccgaagcagtgcctttgatagaacactg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ggaattcatttcacaccgtgatgaacaaaagcccgaagcagtgcctttgatagaacactg 450
Query: 64 catctgtaatgaaagggaagtgggagaaagaaataggcaaggctcttttattttgctctc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 catctgtaatgaaagggaagtgggagaaagaaataggcaaggctcttttattttgctctc 390
Query: 124 aatgataattgtcatggtatttaattcacagtaacattagtggaaaaattatatatgtta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aatgataattgtcatggtatttaattcacagtaacattagtggaaaaattatatatgtta 330
Query: 184 gtcactacactaagtgctcaaattagagacctaatagaatttcttctcagtgaaactaga 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gtcactacactaagtgctcaaattagagacctaatagaatttcttctcagtgaaact--- 273
Query: 244 agaagacagcaggcaaagtaggcactaggaagtttatatttcaccg--ccaggagaatta 301
||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 272 agaagacagcaggcaaagtaggcactaggaagtttatatttca--gtatcaggagaatta 215
Query: 302 tgaattataca 312
|||||||||||
Sbjct: 214 tgaattataca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 709
Length adjustment: 9
Effective length of query: 303
Effective length of database: 700
Effective search space: 212100
Effective search space used: 212100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_f01.g1 MSMg01no184_f01.g1 CHROMAT_FILE:
MSMg01no184_f01.g1 PHD_FILE: MSMg01no184_f01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:38 2005
(662 letters)
>mm_chr16_26562372_26563433
Length = 1062
Score = 1265 bits (654), Expect = 0.0
Identities = 660/662 (99%)
Strand = Plus / Plus
Query: 1 aaaggtcaaatattttttaaatatttcaaaatatatttgctatgttcagggtgctcttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaggtcaaatattttttaaatatttcaaaatatatttgctatgttcagggtgctcttta 260
Query: 61 aaatccataaacacagggctctcatcttcaattattaacaagccactatatggctgagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatccataaacacagggctctcatcttcaattattaacaagccactatatggctgagta 320
Query: 121 ctttgatcctatcaatcaggaggcagagtcaaaggcagatagatggctatgagttcaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttgatcctatcaatcaggaggcagagtcaaaggcagatagatggctatgagttcaagg 380
Query: 181 ctagcctgatgtacatagtgagttccagccaaccatgtttacacagtaagactcagtcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctagcctgatgtacatagtgagttccagccaaccatgtttacacagtaagactcagtcta 440
Query: 241 agaaaataaaataataatgatgatactattattatcattattaagttagcaattggtcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaaataaaataataatgatgatactattattatcattattaagttagcaattggtcat 500
Query: 301 aacaaaatagaaggtataataatatctatccagcactcacaagatataagttgccaattg 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 aacaaaatagaaggtataataatatctatccagcactcacaagatgtaagttgccaattg 560
Query: 361 cttcatttttgcttgaggtctcaccttcaactaggtaagaactgatgttaggcaaactat 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttcgtttttgcttgaggtctcaccttcaactaggtaagaactgatgttaggcaaactat 620
Query: 421 cttccagttgactggttagagagaagacatttaaacatggactctgtaactctggacctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttccagttgactggttagagagaagacatttaaacatggactctgtaactctggacctg 680
Query: 481 aggttatatttgctatccagagaactttgcacctcaaattcttgagccactctgattaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aggttatatttgctatccagagaactttgcacctcaaattcttgagccactctgattaaa 740
Query: 541 gatttatgccattgaattgatttaattaactatttgtagtgtccacaactggatctgatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gatttatgccattgaattgatttaattaactatttgtagtgtccacaactggatctgatt 800
Query: 601 ctgagcagtctttgccactcaaacagcacacggctgattccaagaagtgcttgctgacaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctgagcagtctttgccactcaaacagcacacggctgattccaagaagtgcttgctgacaa 860
Query: 661 gg 662
||
Sbjct: 861 gg 862
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
