Query= MSMg01no184_n22.b1 MSMg01no184_n22.b1 CHROMAT_FILE:
MSMg01no184_n22.b1 PHD_FILE: MSMg01no184_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:25 2005
(315 letters)
>mm_chr16_38008322_38009036
Length = 715
Score = 565 bits (292), Expect = e-165
Identities = 305/310 (98%), Gaps = 4/310 (1%)
Strand = Plus / Minus
Query: 5 gaattcaatgttctttttaagttctaaagagccatgtctgatacacaggatgcttgcttg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gaattcaatgttctttttaagttctaaagagccatgtctgatacacaggatgcttgcttg 453
Query: 65 ctttcttgaactcattggagtccaagttggtccttcaaggaaagggggcttgagacaact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ctttcttgaactcattggagtccaagttggtccttcaaggaaagggggcttgagacaact 393
Query: 125 caggagatgtgggcagatctgtgttgtgaagaaagacaccttcagtcccaagattttcag 184
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 392 caggagatgtgggcagatctgtgttgtgaagaaagacatcttcagtcccaagattttcag 333
Query: 185 tcaacagaaaacatgcggtgggggtggagctgggcctggcactgggcctggccctgggcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tcaacagaaaacatgcggtgggggtggagctgggcctggcactgggcctggccctgggcc 273
Query: 245 tggccttaggaccaacagttgcatcgtgtggcgaca--tcggcagaggaaatgtttactt 302
|||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||
Sbjct: 272 tggccttaggaccaacagttgcatcgtgtggc-a-atgtcggcagaggaaatgtttactt 215
Query: 303 cggaaggatt 312
||||||||||
Sbjct: 214 cggaaggatt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_n22.g1 MSMg01no184_n22.g1 CHROMAT_FILE:
MSMg01no184_n22.g1 PHD_FILE: MSMg01no184_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:25 2005
(290 letters)
>mm_chr16_37888847_37889536
Length = 690
Score = 522 bits (270), Expect = e-153
Identities = 282/286 (98%)
Strand = Plus / Plus
Query: 1 cagaatgtagaagagtgtttcagttggctgtaagctggggcaagcagtggctgggaaaga 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 cagaatgtagaagagtgtttcagttggctgtgagctggggcaagcagtggctgggaaaga 260
Query: 61 caatatttgcaaagcagttaatgtttcagatttgcggaaatgggagcagctcatgggtcg 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 caatatttgcaaagcagttaatgtttcagatttgtggaaatgggagcagctcatgggtcg 320
Query: 121 ctggttgctgcctagaaaaaacatcttacaaaaacaggcctaggaactgcagggatgagg 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctggttgctgcctagaaaaaccatcttacaaaaacaggcctaggaactgcagggatgagg 380
Query: 181 ggaaaaaaccattctggcctcttgctgtcctggataaaactgccccgcttcttagagctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaaaaaaccattctggcctcttgctgtcctggataaaactgccccgcttcttagagctg 440
Query: 241 gtgacatgacctacctgtagccatcagatgccccaaacattcaggg 286
||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgacctgacctacctgtagccatcagatgccccaaacattcaggg 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
