CTGGTTACGGGTGGCTGGCCAGAGAGTCCCCTGGGATTACATGGCTTCAT
CTCCCAAATGGTGAGATTTCAAAAAGTTCTCTCTGACTTCACCTTTCCAT
GGATTCTAGTGATCAAATTCACCTCCTTGTGCTTGATAGGCAAGTGTTGT
CTTGTCTGAACTATCTTCCCCACTCCATAGTCATATTATTTTCAAACTTC
TTTTTTCTCTTTTCTTTTCAAAGTTCTTCTGTATTTCAAGAAAGCTCTGT
TTTGCACACTTTTTCAGATTATTTATCATATTAGTGTTGGCTTTACCCAA
TAAAGTTATTTTTTACTTCCCCCCCCCACAGCACAATATACATTTGTTAA
TCCATCATTCACCACCCTGAGGAGATAAAACAGTGAACTCAAGGCCAATC
TGGCTTACAATAGAGAATTCAAAGTCAGCCTGAGTTGCATATGGATATAA
TCACTTTAAAACATGAAAATTACTCAAATATTCCTTGTTCAGCTTAATGT
GATGATTCTGTGTCCTGCTTTCTTATAACTTTCATTGATACGTCCCTATT
TATTACTCTTATTTATTACCATCAAATTTATTTTCAATACCTTCTCTATA
AACTCCTACATCTTTTTCTACTCTTGTTACTATATCTATTCAGATTAATA
CAGTTTCATTTACACCTCTGTATCCATTAATTTATTTCGCTCTCCATTCC
TTTCTCCTTTTTTTATTCAATCATACN

TCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTAGATTGAAATATAAAATAGGT
TCAACTCAAAATTTGAGATTCAACTAATAACACAATGCTCAGGGAGATGA
AGTGCCCTGTTCAAGGACAGATGGCTAATTATCTGGAGGGTGGGGACTAA
AACTCAAGTCCCTCAGCTATCAATTAAACATCTTTCATCTACAGTGTCAC
AGTCACTAATTGATTAGGATTTTCAAAGATGAGCAAAATCATGGTTTGTC
TTTGAAATGTACAAATTTGTAAGGATAATTAATAGATAAAGCACCCACAA
CTTACTAGTAGGAAAATATATATCATATCATATACCATACATGTATGCTC
CATTACCTATAAAGAAAATGTTTCTCATAATATTAGACTCAAGCTTCAAC
TTGTAAAAGCTGATAAAGTGTCTAAAGTCTATATCCTTCTTCAAAGTAAC
ATTGCATCTGCTGGAAAATGTCATCTTTACTCCAACTTCAGAAATTTGAA
TTATTGTCCAGATGGGTAATGATCATTCACTAGAAGTACCCCTAAAACAA
GGTGTCTCTCTGGATAATGCATAAATATTAATAAAGACATTTTTCAGGAA
TCAGTGCTAAGATCAGAGGAATATGAAGAATCTATATCAATAGAGTGCTG
CTAGCCTAAGGGAAAATAGAAATATATAGTCTATGATGAATC

Query= MSMg01no188_j06.b1 MSMg01no188_j06.b1 CHROMAT_FILE:
MSMg01no188_j06.b1 PHD_FILE: MSMg01no188_j06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:16 2005
         (299 letters)



>mm_chr16_71014276_71014974
          Length = 699

 Score =  540 bits (279), Expect = e-158
 Identities = 294/299 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtggctggccagagagtcccctgggattacatggcttcatctcccaaatggtgagatttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtggctggccagagagtcccctgggattacatggcttcatctcccaaatggtgagatttc 260

                                                                       
Query: 61  aaaaagttctctctgacttcacctttccatggattctagtgatcaaattcacctccttgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaagttctctctgacttcacctttccatggattctagtgatcaaattcacctccttgt 320

                                                                       
Query: 121 gcttgataggcaagtgttgtcttgtctgaactatcttccccactccatagtcatattatt 180
           ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 321 gcttgataggcaagtgttgtcatgtctgaactatcttccccactccgtagtcatattatt 380

                                                                       
Query: 181 ttcaaacttcttttttctcttttcttttcaaagttcttctgtatttcaagaaagctctgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcaaacttcttttttctcttttcttttcaaagttcttctgtatttcaagaaagctctgt 440

                                                                      
Query: 241 tttgcacactttttcagattatttatcatattagtgttggctttacccaataaagttat 299
           |||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 441 tttgcacaatttttcagattaattatcatattaatgttggctttacccaataaagttat 499


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space:   200100
Effective search space used:   200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no188_j06.g1 MSMg01no188_j06.g1 CHROMAT_FILE:
MSMg01no188_j06.g1 PHD_FILE: MSMg01no188_j06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:16 2005
         (302 letters)



>mm_chr16_71070092_71070793
          Length = 702

 Score =  576 bits (298), Expect = e-169
 Identities = 301/302 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   attagattgaaatataaaataggttcaactcaaaatttgagattcaactaataacacaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 attagattgaaatataaaataggttcaactcaaaatttgagattcaactaataacacaat 591

                                                                       
Query: 61  gctcagggagatgaagtgccctgttcaaggacagatggctaattatctggagggtgggga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gctcagggagatgaagtgccctgttcaaggacagatggctaattatctggagggtgggga 531

                                                                       
Query: 121 ctaaaactcaagtccctcagctatcaattaaacatctttcatctacagtgtcacagtcac 180
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ctaaaactcaagtcccttagctatcaattaaacatctttcatctacagtgtcacagtcac 471

                                                                       
Query: 181 taattgattaggattttcaaagatgagcaaaatcatggtttgtctttgaaatgtacaaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 taattgattaggattttcaaagatgagcaaaatcatggtttgtctttgaaatgtacaaat 411

                                                                       
Query: 241 ttgtaaggataattaatagataaagcacccacaacttactagtaggaaaatatatatcat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ttgtaaggataattaatagataaagcacccacaacttactagtaggaaaatatatatcat 351

             
Query: 301 at 302
           ||
Sbjct: 350 at 349


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 702
Length adjustment: 9
Effective length of query: 293
Effective length of database: 693
Effective search space:   203049
Effective search space used:   203049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)