Query= MSMg01no190_c18.b1 MSMg01no190_c18.b1 CHROMAT_FILE:
MSMg01no190_c18.b1 PHD_FILE: MSMg01no190_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:20 2005
(320 letters)
>mm_chr16_88784515_88785235
Length = 721
Score = 547 bits (283), Expect = e-160
Identities = 307/315 (97%), Gaps = 1/315 (0%)
Strand = Plus / Plus
Query: 7 attctcatttatattttaaggcacaaattctagcagttagacaaaagccaacattcctca 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 attctcatttatattttaaggcacaaattctagcagttagacaaaagccaacattcctca 266
Query: 67 gggagccagttcttatttctggcagaaa-ggggaaatggctacctatgagcttaccaaaa 125
||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 267 aggagccagttcttatttctggcagaaagggggaaatggctacctatgagctaaccaaaa 326
Query: 126 tgcatgtgtcttccaggcttcctcaccatcacaagcgctcttacacatttcagtccatgc 185
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tgcacgtgtcttccaggcttcctcaccatcacaagcgctcttacacatttcagtccatgc 386
Query: 186 tggcagcttggcttttctcagggactcctaccctaaacctctctagtacctgggcttctt 245
||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 387 tggcagcctggcttttctcagggactcctaccctaaacctctctagcacgtgggcttctt 446
Query: 246 ttccctcagtttctcattctcttataacccttctatatcagctatccccacctttggtcc 305
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 447 ttccctcagtttctcattctcttataacccttctatatcagctatccccatctttggtcc 506
Query: 306 cctctctcttgcctc 320
|||||||||||||||
Sbjct: 507 cctctctcttgcctc 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 721
Length adjustment: 9
Effective length of query: 311
Effective length of database: 712
Effective search space: 221432
Effective search space used: 221432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no190_c18.g1 MSMg01no190_c18.g1 CHROMAT_FILE:
MSMg01no190_c18.g1 PHD_FILE: MSMg01no190_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:20 2005
(276 letters)
>mm_chr16_88970149_88970827
Length = 679
Score = 487 bits (252), Expect = e-142
Identities = 270/278 (97%), Gaps = 5/278 (1%)
Strand = Plus / Minus
Query: 1 tttagcactcattatcccccttgtgctttaatgaaaccacataaaaccctgttccataat 60
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 477 tttagcactcattatcccccttgtgctttaatgaaaccacat-aaaccctgttccacaat 419
Query: 61 cactctttgaaatttatattgagatctaatattcttgccattgaaagcatttgaataatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 cactctttgaaatttatattgagatctaatattcttgccattgaaagcatttgaataatt 359
Query: 121 tctaagacactctgaggaatatttcttaatctttaaagtccttcatttcttggactaaac 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tccaagacactctgaggaatatttcttaatctttaaagtccttcatttcttggactaaac 299
Query: 181 tatgacataaattttactgtttaatcctttgcagtttcatagtta----tctggcattaa 236
||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 298 tatgacataaattttactgtttaatcctttgtagtttcatagttagttatctggcattaa 239
Query: 237 atagacttatattgccttgccaccaacccaggtgtgtt 274
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 atagacttatattgccttgccaccaacccaggtgtgtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 679
Length adjustment: 9
Effective length of query: 267
Effective length of database: 670
Effective search space: 178890
Effective search space used: 178890
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
