TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACTTCTATTATAAATTTGACCTCAGTTAGAAGTGTGTTACAACAAT
TTTAGGTGTCTGTTTTACTGAATTCTTTAGTCACTTTAATCAACCCAGCA
TGACAGCAAGTTGGTTTTGTAAATATGAAGTCTATCTGTAACTGAACCAA
CTGTAGGGGGACAGAATGTTCAAGGATGTTAAACAAGCTTATCTCCTCCT
CTTCATTGACAGTCTCTATGTGAGTGTCGGCAAAGGAAGAGACTTGACAT
GTCTCTGGATTTTACCTTCACAACTTAAAAATACAACTTGGATTTTAACC
CTGTGACTACCTTACTTTAACTTGCAAATATAATTAATGATTTCCCCAGG
ACATTCATAAGTAGATACTCCCAAAATTGTATAAACATGTGTGCCTATCA
TTTTATTGCTTATATACTTCTACTATGATACATTATATATTCCAAATTCT
CCAAATCTATAAGGCTTGGTATCCTCCAAATCTATAAGACTTGCTGTAAA
ATGAAGGAATTCTCACCAGGGATGGCTTTCCAAATACAAATGCTTTTAGT
CCTCTGTTGACAACACTGTGCAAGCACATATATATATATATTTGATTTAG
TTTTTATTCCACATCAAATCCTGCATCCATATGCCTTTTATCTGCATTAC
TCTTGGCCTGTTGT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACTCCTAGTCACTCCCATTCTCGGG
GTGTAATAGTGGGGTGATGGGCAAGCAACAAATCAGGAGCTGTCACGCCA
TATCACGTGCTGAAACGTCACGCTGCGGGTTATAAAAGCAGCGCCAGTTT
CCCGGTTCGGGGTCTTCCTGAGAAGCAAGCAATAAAGCTTTTGCCGCGGA
AGATTCTGGTTTGTTGCGTCTTTCTTGCCGGTCGAGCGGGACGCAATAAG
GGAGCAGGGTGGAGGGAGCGTATAGGGGACTTTTGAGATAGCATTTGAAA
TGTAAATGAAGTATTTTTTTACCCCCCCCCCCCCCCAAAAAAAGGAAGAC
CTCTTTATCCTTCCTAAACCGCCCCACTGAAAGGAGACAAAGAATTTAGA
CATATGAAACTGTGGGCCTTATTCTCACTCAGATCACCACAATGTACTAC
TAAGTGGCAGCATATGACTTACGCATTCATATTCCTATTTCCAAAACAGC
TGGGCTGTGGATATAGCACCTACTATTATGTTTCGCCTTGTTATGTACAA
TAACTCGAGTTCCATTTCCCATAACCCCTTGCCATAAACTGACGTTATCC
CTATAAGCTCCCCACTGCTTGCGTATGCTTTGTATCTTTATTAATGCGCT
TGTGCTTTGCCTCCATATCTATCCTAATCTACTTTCG

Query= MSMg01no193_d05.b1 MSMg01no193_d05.b1 CHROMAT_FILE:
MSMg01no193_d05.b1 PHD_FILE: MSMg01no193_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:30 2005
         (537 letters)



>mm_chr16_78879963_78880901
          Length = 939

 Score =  924 bits (478), Expect = 0.0
 Identities = 521/536 (97%), Gaps = 2/536 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcacttctattataaatttgacctcagttagaagtgtgttacaacaattttaggt 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ggaattcacttctattataaatttgacctcagttagaagtgtgttacaacaattttaggt 680

                                                                       
Query: 64  gtctgttttactgaattctttagtcactttaatcaacccagcatgacagcaagttggttt 123
           |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gtctgtattactgaattcttcagtcactttaatcaacccagcatgacagcaagttggttt 620

                                                                       
Query: 124 tgtaaatatgaagtctatctgtaactgaaccaactgtagggggacagaatgttcaaggat 183
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tgtaaatatgatgtctatctgtaactgaaccaactgtagggggacagaatgttcaaggat 560

                                                                       
Query: 184 gttaaacaagcttatctcctcctcttcattgac--agtctctatgtgagtgtcggcaaag 241
           |||||||||||||||||||||||||||||||||  |||| |||||||| |||| ||||||
Sbjct: 559 gttaaacaagcttatctcctcctcttcattgacaaagtcactatgtgactgtcagcaaag 500

                                                                       
Query: 242 gaagagacttgacatgtctctggattttaccttcacaacttaaaaatacaacttggattt 301
           ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 499 gaagagactagacatgtctctggattttaccttcacaatttaaaaatacaacttggattt 440

                                                                       
Query: 302 taaccctgtgactaccttactttaacttgcaaatataattaatgatttccccaggacatt 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 taaccctgtgactaccttactttaacttgcaaatataattaatgatttccccaggacatt 380

                                                                       
Query: 362 cataagtagatactcccaaaattgtataaacatgtgtgcctatcattttattgcttatat 421
           ||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 379 cataagtagatactctcaaaattgtataagcatgtgtgcctatcattttattccttatat 320

                                                                       
Query: 422 acttctactatgatacattatatattccaaattctccaaatctataaggcttggtatcct 481
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 319 acttctactatgatacattatatagtccaaattctccaaatctataaggcttggtatcct 260

                                                                   
Query: 482 ccaaatctataagacttgctgtaaaatgaaggaattctcaccagggatggctttcc 537
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 259 ccaaatctataagacttgctgtaaaatgaaggaattctcaccaggtatggctttcc 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 939
Length adjustment: 10
Effective length of query: 527
Effective length of database: 929
Effective search space:   489583
Effective search space used:   489583
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)