MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-193K12
Chromosome	16 (Build37)
Map Location	87,914,533 - 87,914,871
singlet/doublet	singlet
Overlap gene	Grik1
Upstream gene	N6amt1, Zfp294, ORF5, LOC100040088, Usp16, Cct8, B130034C11Rik, LOC435486, ORF63, Bach1, LOC100039901
Downstream gene	EG622373, Cldn17, Cldn8, Gm312, 2310079G19Rik, 2310002B14Rik, EG665513, 2310061N02Rik, Krtap13-1, Krtap13, 2310034C09Rik, 2310057N15Rik, EG546672, EG433047, 4930553J12Rik, Krtap14, Krtap15, Krtap16-9, Krtap16-1, Krtap16-5, Krtap16-4, Krtap8-2
Link	Open Mouse BAC browser

Click to get alignment info.

name	N6amt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67768 MGI:1915018
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp294 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78913 MGI:1926163
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	ORF5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53858 MGI:1858215
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040088 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040088
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	Usp16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74112 MGI:1921362
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cct8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12469 MGI:107183
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B130034C11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:414095 MGI:3041186
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC435486 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435486
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	ORF63 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224419 MGI:2446584
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bach1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12013 MGI:894680
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039901 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039901
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Grik1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14805 MGI:95814
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG622373 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622373 MGI:3645674
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Cldn17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239931 MGI:2652030
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cldn8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54420 MGI:1859286
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm312 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239932 MGI:2685158
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs

name	2310079G19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69699 MGI:1916949
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein

name	2310002B14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69533 MGI:1916783
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665513 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665513 MGI:3648908
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 8 Proteins pseudo : _no_value

name	2310061N02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69661 MGI:1916911
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 6 Proteins

name	Krtap13-1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268905 MGI:2146359
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Krtap13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16699 MGI:1330835
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310034C09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:117172 MGI:2152338
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310057N15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69696 MGI:1916946
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG546672 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546672 MGI:3645197
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 7 Proteins

name	EG433047 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433047 MGI:3647686
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	4930553J12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75351 MGI:1922601
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 5 Proteins

name	Krtap14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23927 MGI:1346079
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Krtap15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26560 MGI:1347350
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Krtap16-9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170657 MGI:2157769
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Krtap16-1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170651 MGI:2157572
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Krtap16-5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77918 MGI:1925168
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Krtap16-4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170654 MGI:2157757
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Krtap8-2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16704 MGI:1330295
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	N6amt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39540505 GeneID:67768 MGI:1915018
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : N-6 adenine-specific DNA methyltransferase 1 (putative) transcript_id : NM_026366.1

name	Zfp294 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486726 GeneID:78913 MGI:1926163
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 294 transcript_id : NM_001081068.1

name	ORF5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119360351 GeneID:53858 MGI:1858215
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : open reading frame 5 transcript_id : NM_016924.2

name	LOC100040088 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268134 GeneID:100040088
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : hypothetical protein LOC100040088 transcript_id : XM_001474061.1

name	Usp16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13195675 GeneID:74112 MGI:1921362
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin specific peptidase 16 transcript_id : NM_024258.1

name	Cct8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126723460 GeneID:12469 MGI:107183
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chaperonin subunit 8 (theta) transcript_id : NM_009840.3

name	B130034C11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268117 GeneID:414095 MGI:3041186
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : RIKEN cDNA B130034C11 gene transcript_id : XM_001473307.1

name	ORF63 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450068 GeneID:224419 MGI:2446584
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : open reading frame 63 transcript_id : NM_144854.1

name	Bach1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82659113 GeneID:12013 MGI:894680
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BTB and CNC homology 1 transcript_id : NM_007520.2

name	LOC100039901 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268120 GeneID:100039901
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039901 transcript_id : XM_001473375.1

name	Grik1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348035 GeneID:14805 MGI:95814
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, kainate 1 transcript_id : NM_010348.2

name	Grik1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381111 GeneID:14805 MGI:95814
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, kainate 1 transcript_id : NM_146072.3

name	Cldn17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801892 GeneID:239931 MGI:2652030
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : claudin 17 transcript_id : NM_181490.3

name	Cldn8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542405 GeneID:54420 MGI:1859286
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : claudin 8 transcript_id : NM_018778.2

name	Gm312 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400718 GeneID:239932 MGI:2685158
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : gene model 312, (NCBI) transcript_id : XM_977282.1

name	2310079G19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268136 GeneID:69699 MGI:1916949
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein product : RIKEN cDNA 2310079G19 gene transcript_id : XM_484566.3

name	2310002B14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351733 GeneID:69533 MGI:1916783
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310002B14 gene transcript_id : NM_027105.2

name	2310061N02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268129 GeneID:69661 MGI:1916911
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 6 Proteins product : RIKEN cDNA 2310061N02 gene transcript_id : XM_001473644.1

name	Krtap13-1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34147241 GeneID:268905 MGI:2146359
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : keratin associated protein 13-1 transcript_id : NM_183189.1

name	Krtap13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754491 GeneID:16699 MGI:1330835
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : keratin associated protein 13 transcript_id : NM_010671.1

name	2310034C09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368102 GeneID:117172 MGI:2152338
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310034C09 gene transcript_id : NM_054100.2

name	2310057N15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13386207 GeneID:69696 MGI:1916946
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310057N15 gene transcript_id : NM_027170.1

name	EG546672 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400721 GeneID:546672 MGI:3645197
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 7 Proteins product : predicted gene, EG546672, transcript variant 3 transcript_id : XM_885642.2

name	4930553J12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400723 GeneID:75351 MGI:1922601
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 5 Proteins product : RIKEN cDNA 4930553J12 gene transcript_id : XM_484569.3

name	Krtap14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350453 GeneID:23927 MGI:1346079
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : keratin associated protein 14 transcript_id : NM_013707.2

name	Krtap15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305212 GeneID:26560 MGI:1347350
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : keratin associated protein 15 transcript_id : NM_013713.1

name	Krtap16-9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113865952 GeneID:170657 MGI:2157769
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : keratin associated protein 16-9 transcript_id : NM_130876.3

name	Krtap16-1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21357426 GeneID:170651 MGI:2157572
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : keratin associated protein 16-1 transcript_id : NM_130870.1

name	Krtap16-5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114158705 GeneID:77918 MGI:1925168
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : keratin associated protein 16-5 transcript_id : NM_130857.2

name	Krtap16-4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21426872 GeneID:170654 MGI:2157757
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : keratin associated protein 16-4 transcript_id : NM_130873.1

name	Krtap8-2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113722126 GeneID:16704 MGI:1330295
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : keratin associated protein 8-2 transcript_id : NM_010676.2

name	N6amt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39540506 CCDS:CCDS28289.1 GeneID:67768 MGI:1915018
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : M-N6DNA MTase A; HemK methyltransferase family member 2 product : N6-DNA methyltransferase A protein_id : NP_080642.1

name	Zfp294 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486727 GeneID:78913 MGI:1926163
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger protein 294 protein_id : NP_001074537.1

name	ORF5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119360352 GeneID:53858 MGI:1858215
definition	codon_start : 1 product : hypothetical protein LOC53858 protein_id : NP_058620.2

name	LOC100040088 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268135 GeneID:100040088
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474111.1

name	Usp16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13195676 CCDS:CCDS28291.1 GeneID:74112 MGI:1921362
definition	GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : ubiquitin specific protease 16 protein_id : NP_077220.1

name	Cct8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126723461 GeneID:12469 MGI:107183
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0044267 - cellular protein metabolism [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA] codon_start : 1 product : chaperonin subunit 8 (theta) protein_id : NP_033970.3

name	B130034C11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268118 GeneID:414095 MGI:3041186
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473357.1

name	ORF63 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450069 CCDS:CCDS28292.1 GeneID:224419 MGI:2446584
definition	codon_start : 1 product : hypothetical protein LOC224419 protein_id : NP_659103.1

name	Bach1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680764 CCDS:CCDS28293.1 GeneID:12013 MGI:894680
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : BTB and CNC homology 1 protein_id : NP_031546.1

name	LOC100039901 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268121 GeneID:100039901
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473425.1

name	Grik1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83999995 GeneID:14805 MGI:95814
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0008328 - ionotropic glutamate receptor complex [Evidence IC]; GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005261 - cation channel activity [Evidence IMP]; GO:0005234 - glutamate-gated ion channel activity [Evidence IEA]; GO:0042802 - identical protein binding [Evidence TAS]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004970 - ionotropic glutamate receptor activity [Evidence IEA]; GO:0015277 - kainate selective glutamate receptor activity [Evidence IMP]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IMP]; GO:0048169 - regulation of long-term neuronal synaptic plasticity [Evidence TAS]; GO:0048172 - regulation of short-term neuronal synaptic plasticity [Evidence TAS]; GO:0007268 - synaptic transmission [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform b is encoded by transcript variant 2 product : glutamate receptor, ionotropic, kainate 1 isoform b protein_id : NP_034478.1

name	Grik1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84000015 GeneID:14805 MGI:95814
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0008328 - ionotropic glutamate receptor complex [Evidence IC]; GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005261 - cation channel activity [Evidence IMP]; GO:0005234 - glutamate-gated ion channel activity [Evidence IEA]; GO:0042802 - identical protein binding [Evidence TAS]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004970 - ionotropic glutamate receptor activity [Evidence IEA]; GO:0015277 - kainate selective glutamate receptor activity [Evidence IMP]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IMP]; GO:0048169 - regulation of long-term neuronal synaptic plasticity [Evidence TAS]; GO:0048172 - regulation of short-term neuronal synaptic plasticity [Evidence TAS]; GO:0007268 - synaptic transmission [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform a is encoded by transcript variant 1 product : glutamate receptor, ionotropic, kainate 1 isoform a protein_id : NP_666184.2

name	Cldn17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31377830 CCDS:CCDS28295.1 GeneID:239931 MGI:2652030
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence ISS] [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence ISS] [Evidence IEA] GO_function : GO:0042802 - identical protein binding [Evidence ISS]; GO:0003674 - molecular_function [Evidence ND]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0016338 - calcium-independent cell-cell adhesion [Evidence ISS] codon_start : 1 product : claudin 17 protein_id : NP_852467.1

name	Cldn8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055192 CCDS:CCDS28296.1 GeneID:54420 MGI:1859286
definition	GO_component : GO:0016021 - integral to membrane [Evidence NAS]; GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence IEA] [Evidence IDA] GO_function : GO:0042802 - identical protein binding [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence ISS] codon_start : 1 product : claudin 8 protein_id : NP_061248.1

name	Gm312 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94400719 GeneID:239932 MGI:2685158
definition	codon_start : 1 product : hypothetical protein protein_id : XP_982376.1

name	2310079G19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51769382 GeneID:69699 MGI:1916949
definition	codon_start : 1 product : hypothetical protein LOC69699 protein_id : XP_484566.1

name	2310002B14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312310 CCDS:CCDS28298.1 GeneID:69533 MGI:1916783
definition	codon_start : 1 product : hypothetical protein LOC69533 protein_id : NP_081381.1

name	2310061N02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268130 GeneID:69661 MGI:1916911
definition	codon_start : 1 product : hypothetical protein LOC69661 protein_id : XP_001473694.1

name	Krtap13-1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34147242 CCDS:CCDS28299.1 GeneID:268905 MGI:2146359
definition	GO_component : GO:0005882 - intermediate filament [Evidence IEA] codon_start : 1 product : keratin associated protein 13-1 protein_id : NP_899012.1

name	Krtap13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754492 CCDS:CCDS28300.1 GeneID:16699 MGI:1330835
definition	GO_component : GO:0005882 - intermediate filament [Evidence IEA] codon_start : 1 note : keratin-associated protein 13 product : keratin associated protein 13 protein_id : NP_034801.1

name	2310034C09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16905137 GeneID:117172 MGI:2152338
definition	codon_start : 1 product : RIKEN cDNA 2310034C09 protein_id : NP_473441.1

name	2310057N15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386208 CCDS:CCDS28302.1 GeneID:69696 MGI:1916946
definition	codon_start : 1 product : hypothetical protein LOC69696 protein_id : NP_081446.1

name	EG546672 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82973004 GeneID:546672 MGI:3645197
definition	codon_start : 1 product : hypothetical protein isoform 3 protein_id : XP_890735.1

name	4930553J12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51769388 GeneID:75351 MGI:1922601
definition	codon_start : 1 product : hypothetical protein LOC75351 protein_id : XP_484569.1

name	Krtap14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:142350454 GeneID:23927 MGI:1346079
definition	GO_component : GO:0005882 - intermediate filament [Evidence IEA] codon_start : 1 note : keratin-associated protein 14 product : keratin associated protein 14 protein_id : NP_038735.2

name	Krtap15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305213 GeneID:26560 MGI:1347350
definition	GO_component : GO:0005882 - intermediate filament [Evidence IEA] codon_start : 1 note : keratin-associated protein 15 product : keratin associated protein 15 protein_id : NP_038741.1

name	Krtap16-9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113865953 GeneID:170657 MGI:2157769
definition	codon_start : 1 product : keratin associated protein 16-9 protein_id : NP_570946.2

name	Krtap16-1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21357427 CCDS:CCDS28304.1 GeneID:170651 MGI:2157572
definition	GO_component : GO:0005882 - intermediate filament [Evidence IEA] codon_start : 1 product : keratin associated protein 16-1 protein_id : NP_570940.1

name	Krtap16-5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21426859 GeneID:77918 MGI:1925168
definition	GO_component : GO:0005882 - intermediate filament [Evidence IEA] codon_start : 1 product : keratin associated protein 16-5 protein_id : NP_570927.1

name	Krtap16-4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21426873 GeneID:170654 MGI:2157757
definition	GO_component : GO:0005882 - intermediate filament [Evidence IEA] codon_start : 1 product : keratin associated protein 16-4 protein_id : NP_570943.1

name	Krtap8-2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113722127 GeneID:16704 MGI:1330295
definition	codon_start : 1 note : keratin-associated protein 8.2; HGTpI alpha; keratin-associated protein 8-2 product : keratin associated protein 8-2 protein_id : NP_034806.2

name	LOC435486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435486
definition	number : 1 pseudo : _no_value

name	EG622373 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622373
definition	number : 1 pseudo : _no_value

name	EG433047 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:433047
definition	number : 1

name	EG665513 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149268126 GeneID:665513 MGI:3648908
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 8 Proteins product : predicted gene, EG665513 pseudo : _no_value transcript_id : XR_002291.2

clone name	MSMg01-444F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089B17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-065J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453F13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-544D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274D19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-477G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293G04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-193K12.T7 (MSMg01no193_k12.b1)	MSMg01-193K12.TJ (MSMg01no193_k12.g1)
ACC	AG382867	AG382868
length	871	727
length of high quality (start - end)	75 (47 - 121)	340 (78 - 417)
definition	CHROMAT_FILE: MSMg01no193_k12.b1 PHD_FILE: MSMg01no193_k12.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:12:12 2005	CHROMAT_FILE: MSMg01no193_k12.g1 PHD_FILE: MSMg01no193_k12.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:12:12 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG GAATTCCTTCCTAATAAGTGTTGTCTCCCCGAGGCTTTGCTTGTTAGTCT GGTCTCCTTGCTCAAATTTCAAACCCTCGTCATCCTCAATTCTGTCGAAG TTGATGCTTCCGGTGCCTCATCCAATGAAGGCAGGGCGCGAGGAGCATGA GCTATGGATGTGGCGTCCAGTGCTTTATCAAGTATGACTGGAAGAAAGGG TAGGGTTTTTATTTCCCTTTCTCCCCATCAGAACCCTTTAATCTTACTAA TCTTGTACATTTATCACACCTTTTCTTTTTTTTCTTGTGCAATATCATTC ACCCCCTTCTTCCTTTTTTTTTTTTCCCCCCCCCCCCCCCCCTCTTCCAT TTCTTTCTTCTTGTATTTTCCGTTTGTTTCCCCCCCCCACAAAAAAAAAA TAATTCCTTTCCCTTTCCTTCCCCCTTTTTCTATTTCTTTCCTTCCTCCG CCCCGTTTTTAATCTTTTTTCTCCTTTCCGCCCCTCCCCCCCTTCTCATT CTCTACCCATACGTCCTTCCCCCCTTCTCTTCTTCCCTCATTTTCTTCCC TTTTCTCTTCGCGTTTTTTCCCTTCCTCTCCACTTCTTCCTTTCCCCTCT TTTTTTATTCCTATATTCTCTTCCTCCCTAATTTTTTCATACACTCTATC ATCTCTCCTTCNTCTACTCCTTCCACCCTTTTTCTTCCGCTTATTTACCT TCCTCCTTCTTCTCCTACGCGCATTTGTCTCCCTTACTCCTCTTCTTTTC TTTATCCCTTCCTCCTCCCATCCCTTTCCATTTTTCGTCATTCTACCCAC ACATTCCTCTATCTCTAACTC	CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXCTACTTAATATTTATTTAGAATG AGAAACTTGAACATGGCACCTCCCCCTTTTCTTATTAATTAGAGCCTTGA AGATAGAAGAGTGGGCATTCCTAGCTTTGGCTGATAGATTTCATAAGGGT TTCATAGCAACCCTGCAGTACTTATCACTGAGATAGTGAAATGTCTTAAT ATCTTCTTATCTCTCTGGTGATCAACATCCAAATCACCCCAATTTTCAGG CTCCCCTTACCGGGATAAAATTACAATTGCTATTCTTCAACTACAAGAAG AAGGGAAGCTTCATATGATGAAAGAGAAATGGTGGAGGGGAAATGGCTGT CCTGAAGAAGACAGTACACACCCCAGTGCTCTAGGAGTGGAAAATATCGG GGGCATCTTCATTGTTCTGGCTGCAGGACTCGTCCTTTCTGTGTTTGTAG CCATTGGAGAATTCATATACAAATCACGGAAGAACAATGACATTGAGCAG GTGAGTCATCTCTTTCTAAGACAGGGTAGTTTTTACTTTGAATTTGCTGT CCGAAGCTTGAGAATGTTTTAGGATGCTTTCCCTGTTTTTCCCACCCTAT TGTAATATACGCCTCGATTTTTCTTTCCCGTTTCTCCCCTTTCCCCCCGA TTCTTCGTTTGGCGTTTTTTCTCTCCC
quality values	Open. Hide. 8 8 8 8 8 8 13 18 37 36 29 27 24 22 22 30 37 31 27 25 32 37 37 47 46 30 28 26 26 28 35 34 32 12 11 10 10 14 14 28 43 34 34 28 28 28 42 41 57 57 43 47 47 47 68 68 68 68 68 54 46 46 37 36 27 19 17 17 25 29 42 57 57 50 50 68 59 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 53 53 50 57 57 57 57 57 57 57 57 59 59 59 59 50 38 36 36 33 33 31 30 26 15 12 11 11 9 9 11 11 9 10 10 22 34 39 41 41 48 48 48 48 48 48 37 53 50 47 47 47 57 48 48 57 42 42 42 42 42 47 59 59 59 59 54 48 48 48 46 46 48 48 48 46 46 47 43 43 47 44 42 35 35 35 42 32 32 23 23 18 32 22 25 28 28 38 38 46 37 43 42 42 42 46 54 57 57 57 47 47 47 57 46 44 43 43 43 43 57 57 57 48 47 47 47 47 41 32 24 28 27 30 30 41 36 25 21 30 30 30 36 34 25 21 21 15 15 20 30 30 41 20 18 29 22 21 18 14 14 14 28 24 23 18 18 16 16 20 21 19 12 10 10 8 8 8 8 8 11 10 11 17 15 10 8 8 8 8 8 8 8 9 11 13 13 11 8 8 8 11 15 10 13 9 9 10 11 18 10 10 10 10 10 12 12 12 9 9 11 9 9 10 16 16 16 11 14 13 16 26 25 16 16 13 10 10 8 8 8 8 8 6 6 8 10 9 9 9 9 10 9 8 10 10 8 10 10 12 10 10 10 8 8 9 9 8 7 9 9 9 18 16 14 8 8 8 10 10 12 20 26 16 16 16 17 19 30 32 32 30 17 12 9 9 9 10 10 11 11 11 9 10 10 10 9 12 12 10 13 10 8 8 10 8 8 8 8 6 7 8 8 10 7 6 6 6 6 8 8 8 8 8 9 11 19 18 18 19 15 9 10 8 8 8 8 14 16 25 22 24 20 8 12 9 8 8 8 10 10 9 10 11 10 12 9 11 11 17 12 10 8 8 8 8 8 8 14 16 10 10 13 10 8 8 8 8 8 8 11 9 11 12 18 18 20 26 15 13 12 15 13 9 10 10 13 13 10 10 9 10 9 9 8 8 8 6 6 6 9 10 15 15 9 9 8 8 8 11 13 8 8 8 8 8 13 12 12 10 10 12 12 15 15 12 18 16 11 11 8 8 6 6 7 7 6 8 9 9 8 9 8 8 8 8 8 8 11 13 13 22 15 17 10 10 11 15 10 14 10 10 10 15 11 11 8 8 8 6 6 8 10 9 9 11 8 8 10 10 14 12 16 14 15 24 10 8 6 6 6 8 8 9 6 6 6 6 8 7 10 9 15 9 9 9 8 10 9 8 8 8 8 8 8 8 8 8 8 6 7 10 8 9 9 8 10 11 10 10 10 6 6 6 6 8 10 9 10 13 9 9 9 10 17 11 8 8 6 6 6 8 9 9 14 8 8 8 8 8 11 10 10 10 10 10 11 14 15 32 12 12 9 8 8 10 8 10 8 11 8 8 8 10 8 6 6 8 10 15 10 10 10 11 9 3 0 3 8 6 6 8 8 10 10 8 8 6 9 9 9 12 15 15 22 13 10 10 8 8 8 8 8 8 8 8 6 6 6 12 6 7 8 8 12 12 9 10 11 15 13 12 10 11 11 15 15 9 7 12 8 9 8 8 8 9 9 9 13 11 7 7 7 8 10 8 8 8 13 9 9 12 13 13 10 6 6 6 8 8 14 12 18 18 21 13 8 6 6 6 13 15 13 11 9 8 8 12 11 9 9 7 13 9 9 9 16 16 20 21 16 12 8 8 6 6 10 10 7 7 6 6 6 8 8 6 6 8 8 10 7 7 6 6 6 7 9 10 11 6 8 6 7 8 6 6 6 8 8 10 8 8 8 8 8 8	Open. Hide. 6 6 11 15 12 8 8 8 8 15 18 32 37 37 37 37 37 37 37 41 50 53 53 53 50 50 50 50 47 41 27 21 8 6 6 6 8 10 8 22 15 21 24 30 29 47 47 47 53 36 36 36 37 37 50 53 57 57 57 53 44 35 26 22 26 19 26 14 19 19 34 23 42 47 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 68 68 68 68 68 68 68 68 59 59 48 48 48 50 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 48 48 46 46 46 48 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 43 43 43 50 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 59 59 59 59 59 59 59 57 57 57 59 59 57 57 54 54 57 54 57 57 57 57 57 68 57 57 57 57 57 59 59 59 59 59 59 57 57 57 57 57 57 50 50 59 50 50 50 47 41 25 19 9 8 6 6 6 6 6 15 15 24 14 21 30 41 59 59 59 53 53 53 53 53 53 57 59 59 57 57 57 57 50 50 57 57 59 59 59 59 48 54 54 59 57 68 68 57 57 57 57 57 57 59 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 57 59 59 47 48 48 59 47 43 43 47 59 59 59 59 44 44 32 32 32 44 35 39 43 43 43 42 42 57 48 42 36 37 44 44 31 31 20 28 28 42 42 46 43 39 39 35 32 30 28 20 20 15 25 13 13 18 25 28 42 42 42 42 37 39 35 33 33 24 23 12 20 11 22 12 28 28 47 59 59 53 53 48 43 43 39 36 33 37 27 27 13 11 11 11 11 13 23 32 37 37 43 33 31 15 15 15 21 18 23 34 34 28 30 21 24 13 21 14 18 18 21 18 15 15 12 12 16 11 11 11 10 10 13 22 23 14 15 12 13 12 16 15 10 10 12 16 16 16 13 10 10 10 10 17 11 10 10 9 8 8 8 8 8 8 8 8 12 8 8 6 6 6 8 8 8 9 9 8 8 8 8 8 8 8 10 13 15 13 13 13 10 19 10 8 8 8 8 8 8 11 11 8 8 9 10 13 12 23 16 10 10 10 8 8 8 8 8 15 8 8 8 8 8 12 10 15 12 10 8 8 8 8 8 10 12 18 13 10 10 10 11 11 13 11

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no193_k12.g1 MSMg01no193_k12.g1 CHROMAT_FILE:
MSMg01no193_k12.g1 PHD_FILE: MSMg01no193_k12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:12 2005
         (340 letters)



>mm_chr16_87914333_87915072
          Length = 740

 Score =  632 bits (327), Expect = 0.0
 Identities = 336/339 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctacttaatatttatttagaatgagaaacttgaacatggcacctcccccttttcttatta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ctacttaatatttatttagaatgagaaacttgaacatggcacctcccccttttcttatta 480

                                                                       
Query: 61  attagagccttgaagatagaagagtgggcattcctagctttggctgatagatttcataag 120
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 479 attagagccttgaagatagaagagtgagcattcctagctttggctgatagatttcataag 420

                                                                       
Query: 121 ggtttcatagcaaccctgcagtacttatcactgagatagtgaaatgtcttaatatcttct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ggtttcatagcaaccctgcagtacttatcactgagatagtgaaatgtcttaatatcttct 360

                                                                       
Query: 181 tatctctctggtgatcaacatccaaatcaccccaattttcaggctccccttaccgggata 240
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 359 tatctctctggtgatcaacatccaaatcaccccaactttcaggctccccttaccgggata 300

                                                                       
Query: 241 aaattacaattgctattcttcaactacaagaagaagggaagcttcatatgatgaaagaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 aaattacaattgctattcttcaactacaagaagaagggaagcttcatatgatgaaagaga 240

                                                  
Query: 301 aatggtggaggggaaatggctgtcctgaagaagacagta 339
           |||||||||||||||||||||| ||||||||||||||||
Sbjct: 239 aatggtggaggggaaatggctgccctgaagaagacagta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space:   241961
Effective search space used:   241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information