Query= MSMg01no201_n11.b1 MSMg01no201_n11.b1 CHROMAT_FILE:
MSMg01no201_n11.b1 PHD_FILE: MSMg01no201_n11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:22 2005
(336 letters)
>mm_chr16_26291995_26292731
Length = 737
Score = 594 bits (307), Expect = e-174
Identities = 325/331 (98%), Gaps = 1/331 (0%)
Strand = Plus / Plus
Query: 7 gaattcaggt-tccatatttaacactgcaaaatatcactgagcttttgagttatacagcc 65
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcaggtatacatatttaacactgcaaaatatcactgagcttttgagttatacagcc 266
Query: 66 ccctacaagacttctgtacttattaattaatattcataaattctgcttattagcacatgc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ccctacaagacttctgtacttattaattaatattcataaattctgcttattagcacatgc 326
Query: 126 cagtgtcctgatgtgtgagacagtttggaagtatctcttgacacaacactagtatgtccc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cagtgtcctgatgtgtgagacagtttggaagtatctcttgacacaacactagtatgtccc 386
Query: 186 agacttctgggccttgggtctcttctgcctcatacgcagagatgtcaccagctttaacaa 245
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 387 agacttctgggccttgggtctcttctgcctcatgcgcagagatgccaccagctttaacaa 446
Query: 246 gaaataacatgttcttttctttcttgtatcaatccacattaagaaatgtctgtcaccatg 305
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 447 gaaataacatgttcttttctttcttgtatcaatccacattaaaaaatgtttgtcaccatg 506
Query: 306 agagattcagtgtacttctggttccacatag 336
|||||||||||||||||||||||||||||||
Sbjct: 507 agagattcagtgtacttctggttccacatag 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 737
Length adjustment: 9
Effective length of query: 327
Effective length of database: 728
Effective search space: 238056
Effective search space used: 238056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no201_n11.g1 MSMg01no201_n11.g1 CHROMAT_FILE:
MSMg01no201_n11.g1 PHD_FILE: MSMg01no201_n11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:22 2005
(390 letters)
>mm_chr16_26327618_26328406
Length = 789
Score = 491 bits (254), Expect = e-143
Identities = 317/350 (90%), Gaps = 27/350 (7%)
Strand = Plus / Plus
Query: 54 tagagtagaatcattctatagaatattctagagaatgtagtggtcagggtagctcaactg 113
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 254 tagagtagaatcattctatagaatattctagagaacgtagtggtcagggtagctcaactg 313
Query: 114 gattaagccagggatgctgaggaag-tgaagtgaaaataagaagcccaattaagacttag 172
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 314 gattaagccagggatgctgag-aaggtgaagtgaaaataagaagcccaattaagacttag 372
Query: 173 aggatacgggtgacattctaagggcttcacctttcattcaaatttgaattcaaatggaaa 232
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aggatatgggagacattctaagggcttcacctttcattcaaatttgaattcaaatggaa- 431
Query: 233 ga--caccgact----gttaggttgcgtgtagaaaaaaaataagagccaacatacatcaa 286
|| | | ||||||||| ||||||||||||| | ||||||||||||||||||
Sbjct: 432 --ttca---aatttgtgttaggttgtgtgtagaaaaaaa-tgagagccaacatacatcaa 485
Query: 287 ataatcaaattcaccatttttcttgttctgttgaaaataatacaagtca------ccccc 340
||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 486 ataatcaaattcaccatttttcttgttctgttgaaaataatacaagtcaaggaagcc--- 542
Query: 341 ccctcagtgagtccaggctgaaggtggttacaaatatccatggggaatgt 390
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ---tcagtgagtccaggctgaaggtggttacaaatatccatggggaatgt 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 789
Length adjustment: 9
Effective length of query: 381
Effective length of database: 780
Effective search space: 297180
Effective search space used: 297180
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
