MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-202O18
Chromosome	16 (Build37)
Map Location	43,280,889 - 43,281,087
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Gap43, BC002163
Downstream gene	LOC667484, Zbtb20, LOC100043314, Drd3, Qtrtd1, 2610015P09Rik, Zdhhc23, Gramd1c, Atp6v1a, Nat13, Gm608, Sidt1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gap43 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14432 MGI:95639
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC002163 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170658 MGI:3612445
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	LOC667484 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667484
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 ESTs, 2 Proteins pseudo : _no_value

name	Zbtb20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56490 MGI:1929213
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043314 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043314
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 1 Protein

name	Drd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13490 MGI:94925
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Qtrtd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106248 MGI:1922194
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2610015P09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212153 MGI:1922661
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 ESTs, 1 Protein

name	Zdhhc23 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:332175 MGI:2685625
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gramd1c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207798 MGI:2443024
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp6v1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11964 MGI:1201780
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nat13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72117 MGI:1919367
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm608 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207806 MGI:2685454
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sidt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320007 MGI:2443155
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gap43 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982842 GeneID:14432 MGI:95639
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth associated protein 43 transcript_id : NM_008083.2

name	Zbtb20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9790132 GeneID:56490 MGI:1929213
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger and BTB domain containing 20 transcript_id : NM_019778.1

name	LOC100043314 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267408 GeneID:100043314
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 1 Protein product : similar to poliovirus receptor-related 4 transcript_id : XM_001479949.1

name	Drd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6681220 GeneID:13490 MGI:94925
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dopamine receptor 3 transcript_id : NM_007877.1

name	Qtrtd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54144621 GeneID:106248 MGI:1922194
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : queuine tRNA-ribosyltransferase domain containing 1 transcript_id : NM_029128.2

name	2610015P09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267410 GeneID:212153 MGI:1922661
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 ESTs, 1 Protein product : RIKEN cDNA 2610015P09 gene transcript_id : XM_990993.2

name	Zdhhc23 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:55925619 GeneID:332175 MGI:2685625
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, DHHC domain containing 23 transcript_id : NM_001007460.1

name	Gramd1c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956283 GeneID:207798 MGI:2443024
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GRAM domain containing 1C transcript_id : NM_153528.1

name	Atp6v1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142343848 GeneID:11964 MGI:1201780
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, H+ transporting, lysosomal V1 subunit A transcript_id : NM_007508.5

name	Nat13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892288 GeneID:72117 MGI:1919367
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : N-acetyltransferase 13 transcript_id : NM_028108.3

name	Gm608 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71274137 GeneID:207806 MGI:2685454
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 608, (NCBI) transcript_id : NM_001029889.1

name	Sidt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51036632 GeneID:320007 MGI:2443155
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SID1 transmembrane family, member 1 transcript_id : NM_198034.2

name	Gap43 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679935 CCDS:CCDS28177.1 GeneID:14432 MGI:95639
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005516 - calmodulin binding [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0045165 - cell fate commitment [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0010001 - glial cell differentiation [Evidence IMP]; GO:0007399 - nervous system development [Evidence IEA]; GO:0001558 - regulation of cell growth [Evidence IEA]; GO:0040008 - regulation of growth [Evidence IEA] codon_start : 1 note : growth accentuating protein 43; neuromodulin; brain abundant, membrane attached signal protein 2 product : growth associated protein 43 protein_id : NP_032109.1

name	Zbtb20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790133 CCDS:CCDS28178.1 GeneID:56490 MGI:1929213
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : POZ/zinc finger transcription factor; POZ/zinc finger transcription factor ODA-8; zinc finger protein 288 product : zinc finger and BTB domain containing 20 protein_id : NP_062752.1

name	LOC100043314 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149267409 GeneID:100043314
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479999.1

name	Drd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681221 CCDS:CCDS28179.1 GeneID:13490 MGI:94925
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : D3 receptor product : dopamine receptor 3 protein_id : NP_031903.1

name	Qtrtd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54144622 GeneID:106248 MGI:1922194
definition	GO_function : GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008616 - queuosine biosynthesis [Evidence IEA] codon_start : 1 product : queuine tRNA-ribosyltransferase domain containing 1 protein_id : NP_083404.2

name	2610015P09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149267411 GeneID:212153 MGI:1922661
definition	codon_start : 1 product : hypothetical protein LOC212153 protein_id : XP_996087.2

name	Zdhhc23 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:55925620 CCDS:CCDS28180.1 GeneID:332175 MGI:2685625
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : nNOS-intereacting DHHC-containing Dem protein-L product : DHHC-containing protein 11 protein_id : NP_001007461.1

name	Gramd1c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956284 CCDS:CCDS28181.1 GeneID:207798 MGI:2443024
definition	codon_start : 1 product : GRAM domain containing 1C protein_id : NP_705756.1

name	Atp6v1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560731 CCDS:CCDS28182.1 GeneID:11964 MGI:1201780
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0015078 - hydrogen ion transporter activity [Evidence IEA]; GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006754 - ATP biosynthesis [Evidence IEA]; GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0015992 - proton transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : 70-kDa subunit; lysosomal 70kDa; ATPase, H+ transporting, V1 subunit A1; ATPase, H+ transporting, lysosomal (vacuolar proton pump), alpha 70 kDa, isoform 2; ATPase, H+ transporting, lysosomal 70kD, V1 subunit A, isoform 1 product : ATPase, H+ transporting, V1 subunit A, isoform 1 protein_id : NP_031534.2

name	Nat13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312422 CCDS:CCDS28183.1 GeneID:72117 MGI:1919367
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : Mak3 homolog product : Mak3p homolog protein_id : NP_082384.1

name	Gm608 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71274138 CCDS:CCDS28184.1 GeneID:207806 MGI:2685454
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004571 - mannosyl-oligosaccharide 1,2-alpha-mannosidase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC207806 protein_id : NP_001025060.1

name	Sidt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51036633 CCDS:CCDS28185.1 GeneID:320007 MGI:2443155
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : SID1 transmembrane family, member 1 protein_id : NP_932151.2

name	BC002163 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:72004263 GeneID:170658 MGI:3612445
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC002163 pseudo : _no_value transcript_id : NR_002445.2

name	LOC667484 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149267537 GeneID:667484
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 ESTs, 2 Proteins product : similar to Ran-interacting protein MOG1 pseudo : _no_value transcript_id : XR_034984.1

clone name	MSMg01-445C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296G11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-296G11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-421J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518O24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-304K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290G07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-202O18.T7 (MSMg01no202_o18.b1)	MSMg01-202O18.TJ (MSMg01no202_o18.g1)
ACC	AG387888	AG387889
length	692	722
length of high quality (start - end)	199 (425 - 623)	339 (384 - 722)
definition	CHROMAT_FILE: MSMg01no202_o18.b1 PHD_FILE: MSMg01no202_o18.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:23:54 2005	CHROMAT_FILE: MSMg01no202_o18.g1 PHD_FILE: MSMg01no202_o18.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:23:55 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CCATTTCGGAGCCGAGGGCGCGGAATTCAGACATGACGAAAAAAACAGAC CTTTAATCCCAAACAATGTAGGCAAGGTCAATTTGTAGAAGGACACCCAC CATATTTTAAAGTAAACTGTAATCAAGGGGCAGACAAAGTGAGCAATCAG AGAAAGATTTCACAGAATGAGTCAGAGATAGGATACACCAACTCTCACAA GAACGGATTACCAGAGTTAGTTTGAGGTCAGATACAGCAATTCAGTCAGA AGCCAAGAGAAGCCATATTGAATCAGTCATCTTAGAGGGGTTGCTAACTT CTGAGTTGAACAATCCAGAGTTCAGAAAATTTTTTTTTGCCCCCCTCACC ACAGCAGTAGGCCACCAAGACAATTATATCAGGTGAATAAAAGATACAAA AACATGCTATATGGAGGTGGGTCTTGTAGTCTTACTTTATAGATTGGATC CATGTATAAACAACTTTACATACAATTTATAGTATAGTTTGATACATCTT TTATCTGGTTCTTAGTACAGGTGTTGGGCTGTATGAAGGGGAATGAACTC TAAAGCAAAGGGTAGGTAAGTTAGAAGACTTTGCAACAATCAGTAAGTAT TAGAGAATGCCAGTCTGACATCATTATCTTATATTAGATAATGAAAATCA AATAATATATGGATTTCTATCTTGTTTCCATGTAAACCTTGA	CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXATGCAGTTTGATGCAAGTCAGCAG AGGCACTTGAAGCCAGAGAATGCAAAGGAGCCAGAAGGTTACAAGTTGCT AGAGTTAGTTTGAGACCAAGCAAAGAAATTCAGTGAGGAGCTGAGAGAAC CCAAATTAAATCAGTCAGCTTGGAGAGGAGTATGAGCCAAAACATCTGAG TTAAACCAACTAGTTAGAGTTCATAAAGAACTAGAAAGGGTGAGCCTATT CAGCAGTAAGACGGTGAGACTACAATTACATCAGGCAAATAAAGGTTACA GTTAGAGTTTGTGTTCTTCTCCCTCGCACCCCATCCAGTTTCACCATAAA GGTGCTGTCTTTTTTCCAGTGTATATTTATAGATTTTTTTTAAGATGAAA AATCAGATGTCTGTAAGTGTGTGGATTTATGTTTATATCTTTAATTCAAT TCCATTGATTGAAATGTCTGTTTTATGCTAATACCATGTGGTTTTTATGA CTATACTTCTGTAGTATAACTTGAAGTCAGGGATGGAGATGCTTCCAGCA GTTCTTTCATTGTTCAAGATGGTTTTGGCTATCTTGAGTTTTGGCTTTTC CATATAAAGTTGAGAATTGCCTTTGCATAACTGTAGAGAATTGTGTTTGA ATACTGGTGGGGATTGCAGTGG
quality values	Open. Hide. 3 3 3 6 7 7 6 6 6 9 6 6 6 6 6 6 8 8 11 11 27 27 37 37 37 31 25 22 19 10 7 6 6 6 6 6 6 6 6 9 9 13 11 16 8 8 8 8 8 10 19 34 41 42 50 50 50 36 36 50 50 36 38 36 37 37 42 53 53 53 50 50 50 57 57 57 53 53 50 50 50 38 53 53 44 30 22 12 11 15 10 8 11 7 8 7 8 11 12 15 25 30 37 37 59 59 59 59 48 47 47 53 53 53 50 50 53 53 53 53 53 53 53 53 53 53 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 54 57 57 57 59 57 57 41 41 41 41 41 48 57 57 57 57 57 68 68 68 68 68 68 68 59 59 57 47 47 50 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 53 53 53 57 57 57 53 53 53 53 53 53 53 48 48 48 48 48 48 59 59 59 41 30 24 19 11 10 10 10 10 13 24 34 41 41 41 59 59 59 59 59 59 57 53 53 53 53 53 57 59 57 57 57 57 57 57 59 68 68 68 68 68 57 57 57 57 59 59 59 59 57 57 57 53 53 53 57 57 57 59 59 59 59 59 59 41 27 23 12 8 6 6 6 6 6 10 6 6 6 7 10 19 23 59 59 59 59 59 59 53 53 57 57 57 57 57 57 57 57 53 53 50 50 50 47 36 32 22 18 12 12 12 14 13 18 25 20 9 9 10 9 9 9 13 14 11 11 11 8 8 8 8 8 8 8 8 25 25 59 59 59 59 59 59 59 59 48 48 48 57 57 57 57 57 57 59 59 59 57 53 50 50 50 50 59 50 48 48 43 37 33 28 19 28 20 22 12 12 12 12 12 12 12 12 11 12 12 24 23 23 12 11 9 9 8 8 8 8 8 11 12 12 12 13 16 19 18 30 41 59 59 59 59 59 59 59 59 59 57 53 53 50 50 50 59 59 59 59 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 57 59 59 54 54 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 59 59 59 50 48 57 59 59 59 68 68 68 68 68 68 68 68 59 59 57 54 54 54 59 57 57 57 57 57 57 57 57 57 57 57 57 59 59 59 59 57 54 54 59 59 59 59 59 59 59 59 47 47 47 47 47 48 48 57 57 57 48 48 48 59 57 57 54 57 57 57 59 59 57 57 54 54 54 68 68 59 59 59 59 59 59 57 57 57 57 57 48 48 48 43 43 43 43 33 33 28 37 37 53 59 39 39 39 32 31 20 20 15 16 12 12 11 11 11 12 12 11 12 12 23 20 30 37 37 40 40 48 48 48 48 57 43 57 48 48 42 42 47 47 47 47 48 48 48 57 50 50 47 47 48 48 42 42 42 41 44 30 30 17 17 17 23 21 16 17 17 27 29 37 37 37 35 37 25 25 15 15	Open. Hide. 8 8 10 17 12 8 8 8 8 13 3 0 3 23 23 41 37 47 37 39 50 50 53 53 53 53 53 53 53 53 53 50 48 43 46 43 43 48 37 33 20 20 18 23 31 31 35 48 57 50 50 48 48 47 48 48 48 48 68 68 68 50 50 50 50 50 50 57 68 68 48 48 46 46 50 48 50 50 50 68 68 68 68 68 57 57 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 68 57 57 57 57 38 36 30 19 17 11 12 12 24 38 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 57 59 59 68 59 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 48 57 42 42 30 37 37 46 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 59 59 59 59 59 59 57 59 30 41 21 21 28 28 26 32 32 32 25 13 11 11 10 8 8 8 6 6 6 6 6 6 9 9 11 26 30 34 47 50 50 50 50 50 50 57 59 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 68 68 68 68 68 57 57 54 54 54 59 57 59 44 47 47 48 47 47 43 47 47 59 59 59 59 68 68 57 57 57 57 57 47 47 47 47 47 54 57 57 57 57 57 57 57 57 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 57 59 59 68 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 59 59 57 59 59 57 57 57 57 57 57 54 57 57 57 57 54 54 57 57 57 57 59 59 59 57 54 54 54 54 54 57 59 57 57 57 57 57 57 59 57 50 50 50 48 48 57 59 47 47 37 37 37 37 41 41 41 41 41 37 32 43 36 36 36 37 30 37 30 26 26 34 43 59 47 47 41 41 37 37 41 41 37 39 35 39 35 30 30 33 33 30 25 30 30 32 32 44 37 30 29 32 37 37 37 36 32 41 36 36 39 41 41 41 41 41 43 34 17 10 10 10

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no202_o18.b1 MSMg01no202_o18.b1 CHROMAT_FILE:
MSMg01no202_o18.b1 PHD_FILE: MSMg01no202_o18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:23:54 2005
         (199 letters)



>mm_chr16_43280689_43281287
          Length = 599

 Score =  385 bits (199), Expect = e-111
 Identities = 199/199 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtagtcttactttatagattggatccatgtataaacaactttacatacaatttatagta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tgtagtcttactttatagattggatccatgtataaacaactttacatacaatttatagta 340

                                                                       
Query: 61  tagtttgatacatcttttatctggttcttagtacaggtgttgggctgtatgaaggggaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tagtttgatacatcttttatctggttcttagtacaggtgttgggctgtatgaaggggaat 280

                                                                       
Query: 121 gaactctaaagcaaagggtaggtaagttagaagactttgcaacaatcagtaagtattaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gaactctaaagcaaagggtaggtaagttagaagactttgcaacaatcagtaagtattaga 220

                              
Query: 181 gaatgccagtctgacatca 199
           |||||||||||||||||||
Sbjct: 219 gaatgccagtctgacatca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 599
Length adjustment: 8
Effective length of query: 191
Effective length of database: 591
Effective search space:   112881
Effective search space used:   112881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information