Query= MSMg01no211_k14.b1 MSMg01no211_k14.b1 CHROMAT_FILE:
MSMg01no211_k14.b1 PHD_FILE: MSMg01no211_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:37:00 2005
(155 letters)
>mm_chr16_65084935_65085490
Length = 556
Score = 269 bits (139), Expect = 6e-77
Identities = 145/147 (98%), Gaps = 1/147 (0%)
Strand = Plus / Plus
Query: 10 gaattccaa-tgcctgttatcaacacctagtagataactggctataaattgaataaatag 68
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gaattccaaatgcctgttatcaacacctagtagataactggctataaattgaataaatag 269
Query: 69 gtccaatggaaaataggaaagtacaattgcagaaagtgaccttaatgtgcatggtgcatg 128
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 atccaatggaaaataggaaagtacaattgcagaaagtgaccttaatgtgcatggtgcatg 329
Query: 129 tataactcaaccatgtaaaataagatg 155
|||||||||||||||||||||||||||
Sbjct: 330 tataactcaaccatgtaaaataagatg 356
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 155
Length of database: 556
Length adjustment: 8
Effective length of query: 147
Effective length of database: 548
Effective search space: 80556
Effective search space used: 80556
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no211_k14.g1 MSMg01no211_k14.g1 CHROMAT_FILE:
MSMg01no211_k14.g1 PHD_FILE: MSMg01no211_k14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:37:00 2005
(381 letters)
>mm_chr16_65134453_65135233
Length = 781
Score = 609 bits (315), Expect = e-179
Identities = 351/363 (96%)
Strand = Plus / Minus
Query: 1 acatataagttactgactttcaaaatcatgaatgtcatggcactctccactattaataat 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 acatataggttactgactttcaaaatcatgaatgtcatggcactctccactattaataat 304
Query: 61 attgaataacagatgatagcttataacatactgtgtcacagtgatcctcccattctctta 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 303 attgaataacagatgatagcttataacatactgtgtcgcagtgatcctcccattctctta 244
Query: 121 ggctttgcaaaatctacaaaatcaaaaggtggacccttctctcgcaaagactatctcaaa 180
|||||||||||||||||||||||||||||||| |||| ||||| | |||||||||||| |
Sbjct: 243 ggctttgcaaaatctacaaaatcaaaaggtgggccctactctcactaagactatctcaga 184
Query: 181 gacatttgcacattcatgtttatttttagcactctttgtaataccaagatacagggccaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gacatttgcacattcatgtttatttttagcactctttgtaataccaagatacagggccag 124
Query: 241 cctagatgtcacaaacaaaagaatggataatgagtatgtgatccatatatgggcagggga 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 123 cctagatgtcacaaacaaaagaaaggataatgagtatgtgatccatatatgggcagggga 64
Query: 301 tacataggtgtgttttatttagaaataattaattattgtgttgcttgcaagaaaatatat 360
|||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct: 63 tacataggtgtgttttatttaggaataaataagtattgtgttgcttgcaagaaaatatat 4
Query: 361 gca 363
|||
Sbjct: 3 gca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
